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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 309 310 311 312 313 314 315 316 317 ... 1720 1721 » 15601-15650 / 86044 show all
ckim-dragen	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	88.8889	2	0	2	0	0
ckim-dragen	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	99.4664	99.3603	99.5726	85.2133	466	3	466	2	2	100.0000
ckim-dragen	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	*	99.3735	99.2041	99.5436	81.7204	4113	33	4144	19	8	42.1053
ckim-dragen	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	het	99.3959	99.1682	99.6246	82.9296	2623	22	2654	10	6	60.0000
ckim-dragen	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	92.8571	3	0	3	0	0
ckim-dragen	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	99.3320	99.2657	99.3984	79.0065	1487	11	1487	9	2	22.2222
ckim-dragen	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	98.6331	99.2657	98.0084	78.2327	14464	107	14616	297	18	6.0606
ckim-dragen	INDEL	I1_5	segdupwithalt	het		0.0000		100.0000	0	0	0	0	0
ckim-dragen	INDEL	I1_5	segdupwithalt	hetalt		0.0000		100.0000	0	0	0	0	0
ckim-dragen	INDEL	I1_5	segdupwithalt	homalt		0.0000		100.0000	0	0	0	0	0
ckim-dragen	INDEL	I1_5	tech_badpromoters	*	100.0000	100.0000	100.0000	56.0000	22	0	22	0	0
ckim-dragen	INDEL	I1_5	tech_badpromoters	het	100.0000	100.0000	100.0000	50.0000	8	0	8	0	0
ckim-dragen	INDEL	I1_5	tech_badpromoters	hetalt	100.0000	100.0000	100.0000	50.0000	1	0	1	0	0
ckim-dragen	INDEL	I1_5	tech_badpromoters	homalt	100.0000	100.0000	100.0000	59.3750	13	0	13	0	0
ckim-dragen	INDEL	I6_15	*	*	97.2249	96.4630	97.9990	52.8733	23945	878	23949	489	448	91.6155
ckim-dragen	INDEL	I6_15	*	het	98.9990	98.7043	99.2956	59.4838	9903	130	9867	70	31	44.2857
ckim-dragen	INDEL	I6_15	*	hetalt	95.5238	91.4630	99.9619	38.0544	7821	730	7861	3	3	100.0000
ckim-dragen	INDEL	I6_15	*	homalt	96.6294	99.7115	93.7321	54.6498	6221	18	6221	416	414	99.5192
ckim-dragen	INDEL	I6_15	HG002complexvar	*	98.1726	97.5167	98.8375	57.3399	4673	119	4676	55	54	98.1818
ckim-dragen	INDEL	I6_15	HG002complexvar	het	99.2082	98.6412	99.7818	59.3866	2323	32	2286	5	4	80.0000
ckim-dragen	INDEL	I6_15	HG002complexvar	hetalt	96.4437	93.1316	100.0000	55.3409	1139	84	1179	0	0
ckim-dragen	INDEL	I6_15	HG002complexvar	homalt	97.8586	99.7529	96.0349	55.1086	1211	3	1211	50	50	100.0000
ckim-dragen	INDEL	I6_15	HG002compoundhet	*	93.2228	91.6135	94.8896	36.8488	8040	736	8040	433	432	99.7691
ckim-dragen	INDEL	I6_15	HG002compoundhet	het	92.5867	97.1154	88.4615	85.5556	202	6	161	21	20	95.2381
ckim-dragen	INDEL	I6_15	HG002compoundhet	hetalt	95.5341	91.4607	99.9873	29.2729	7808	729	7849	1	1	100.0000
ckim-dragen	INDEL	I6_15	HG002compoundhet	homalt	12.7119	96.7742	6.8027	58.3176	30	1	30	411	411	100.0000
ckim-dragen	INDEL	I6_15	decoy	*		0.0000		100.0000	0	0	0	0	0
ckim-dragen	INDEL	I6_15	decoy	het		0.0000		100.0000	0	0	0	0	0
ckim-dragen	INDEL	I6_15	decoy	hetalt		0.0000		100.0000	0	0	0	0	0
ckim-dragen	INDEL	I6_15	decoy	homalt		0.0000		100.0000	0	0	0	0	0
ckim-dragen	INDEL	I6_15	func_cds	*	97.6744	97.6744	97.6744	43.4211	42	1	42	1	1	100.0000
ckim-dragen	INDEL	I6_15	func_cds	het	100.0000	100.0000	100.0000	46.6667	24	0	24	0	0
ckim-dragen	INDEL	I6_15	func_cds	hetalt	85.7143	75.0000	100.0000	25.0000	3	1	3	0	0
ckim-dragen	INDEL	I6_15	func_cds	homalt	96.7742	100.0000	93.7500	40.7407	15	0	15	1	1	100.0000
ckim-dragen	INDEL	I6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	94.7238	91.2679	98.4516	67.1749	763	73	763	12	11	91.6667
ckim-dragen	INDEL	I6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	97.2845	95.5466	99.0868	80.4290	236	11	217	2	1	50.0000
ckim-dragen	INDEL	I6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	93.6974	88.3019	99.7951	47.9744	468	62	487	1	1	100.0000
ckim-dragen	INDEL	I6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	92.9134	100.0000	86.7647	77.6316	59	0	59	9	9	100.0000
ckim-dragen	INDEL	I6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
ckim-dragen	INDEL	I6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
ckim-dragen	INDEL	I6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt		0.0000		100.0000	0	0	0	0	0
ckim-dragen	INDEL	I6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
ckim-dragen	INDEL	I6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	97.9137	96.7068	99.1511	64.1489	5139	175	5139	44	40	90.9091
ckim-dragen	INDEL	I6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	99.0173	98.5075	99.5324	77.0540	1518	23	1490	7	3	42.8571
ckim-dragen	INDEL	I6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	97.4894	95.1923	99.9000	43.6220	2970	150	2998	3	3	100.0000
ckim-dragen	INDEL	I6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	97.3094	99.6937	95.0365	73.7548	651	2	651	34	34	100.0000
ckim-dragen	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	97.4560	96.0456	98.9084	63.8644	6072	250	6071	67	60	89.5522
ckim-dragen	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	98.5612	97.7676	99.3678	76.3607	1927	44	1886	12	6	50.0000
ckim-dragen	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	97.0392	94.3279	99.9110	42.3116	3326	200	3366	3	3	100.0000
ckim-dragen	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	96.5802	99.2727	94.0299	72.0565	819	6	819	52	51	98.0769

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