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Explore HG002 comparison results
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Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
15551-15600 / 86044 show all
ckim-dragenSNPtvfunc_cds*
99.3521
99.9771
98.7347
37.1039
437014370560
0.0000
ckim-dragenSNPtvfunc_cdshet
98.9383
99.9624
97.9351
42.1131
265612656560
0.0000
ckim-dragenSNPtvfunc_cdshetalt
100.0000
100.0000
100.0000
64.2857
1001000
ckim-dragenSNPtvfunc_cdshomalt
100.0000
100.0000
100.0000
26.6781
17040170400
ckim-dragenSNPtvlowcmp_AllRepeats_51to200bp_gt95identity_merged*
98.7487
98.3509
99.1498
68.6809
1491251516132
15.3846
ckim-dragenSNPtvlowcmp_AllRepeats_51to200bp_gt95identity_mergedhet
98.7905
98.1855
99.4030
70.9117
9741899962
33.3333
ckim-dragenSNPtvlowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ckim-dragenSNPtvlowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
98.6641
98.6641
98.6641
63.0726
517751770
0.0000
ckim-dragenSNPtvlowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ckim-dragenSNPtvlowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ckim-dragenSNPtvlowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ckim-dragenSNPtvlowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ckim-dragenSNPtvlowcmp_AllRepeats_lt51bp_gt95identity_merged*
99.8358
99.8591
99.8124
64.8592
2763939276735216
30.7692
ckim-dragenSNPtvlowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
99.7926
99.8634
99.7220
66.5121
1754424175764913
26.5306
ckim-dragenSNPtvlowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
96.0000
92.3077
100.0000
82.6087
1211200
ckim-dragenSNPtvlowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
99.9158
99.8613
99.9703
61.4918
10083141008533
100.0000
ckim-dragenSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331*
98.6331
99.2657
98.0084
78.2327
144641071461629718
6.0606
ckim-dragenSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331het
98.0870
99.1898
97.0085
80.9382
905974917728313
4.5936
ckim-dragenSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
96.9697
100.0000
94.1176
90.5556
1501611
100.0000
ckim-dragenSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331homalt
99.5758
99.3915
99.7609
70.9351
5390335423134
30.7692
ckim-dragenSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged*
99.1734
98.5778
99.7763
50.5713
131719133831
33.3333
ckim-dragenSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhet
99.0631
98.4795
99.6536
52.7550
8421386331
33.3333
ckim-dragenSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ckim-dragenSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
99.3724
98.7526
100.0000
45.7143
475647500
ckim-dragenSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ckim-dragenSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ckim-dragenSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ckim-dragenSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ckim-dragenSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged*
99.8397
99.8160
99.8635
64.2706
21704219432
66.6667
ckim-dragenSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhet
99.8217
99.8558
99.7875
65.2986
13852140932
66.6667
ckim-dragenSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
88.8889
10100
ckim-dragenSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
99.8726
99.7455
100.0000
62.1439
784278400
ckim-dragenSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged*
99.8269
99.8611
99.7927
69.0150
14382144432
66.6667
ckim-dragenSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhet
99.8372
100.0000
99.6750
69.7278
914092032
66.6667
ckim-dragenSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
83.3333
10100
ckim-dragenSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
99.8092
99.6190
100.0000
67.6161
523252300
ckim-dragenSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged*
95.8714
96.9697
94.7977
90.1143
160516491
11.1111
ckim-dragenSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhet
97.5866
96.7742
98.4127
90.1946
120412421
50.0000
ckim-dragenSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ckim-dragenSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhomalt
90.9091
97.5610
85.1064
89.8488
4014070
0.0000
ckim-dragenSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ckim-dragenSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ckim-dragenSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
ckim-dragenSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ckim-dragenSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged*
99.1580
99.2264
99.0896
88.0562
1411111415136
46.1538
ckim-dragenSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhet
99.3976
99.2333
99.5624
89.0421
906791044
100.0000
ckim-dragenSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
90.0000
20200
ckim-dragenSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhomalt
98.7242
99.2110
98.2422
85.7580
503450392
22.2222
ckim-dragenSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged*
99.4458
99.2885
99.6035
87.7940
12569125655
100.0000
ckim-dragenSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhet
99.4322
99.2443
99.6207
88.9340
788678833
100.0000