PrecisionFDA
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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
| Entry | Type | Subtype | Subset | Genotype | F-score | Recall | Precision | Frac_NA | Truth TP | Truth FN | Query TP | Query FP | FP gt | % FP ma | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
14751-14800 / 86044 show all | |||||||||||||||
| ciseli-custom | INDEL | I6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged | hetalt | 0.0000 | 1.1765 | 0.0000 | 0.0000 | 1 | 84 | 0 | 0 | 0 | ||
| ciseli-custom | INDEL | I6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged | homalt | 61.9624 | 60.8696 | 63.0952 | 62.8319 | 56 | 36 | 53 | 31 | 30 | 96.7742 | |
| ciseli-custom | INDEL | I6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged | * | 49.2669 | 36.3636 | 76.3636 | 65.9443 | 88 | 154 | 84 | 26 | 25 | 96.1538 | |
| ciseli-custom | INDEL | I6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged | het | 53.1073 | 38.5246 | 85.4545 | 67.2619 | 47 | 75 | 47 | 8 | 7 | 87.5000 | |
| ciseli-custom | INDEL | I6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged | hetalt | 0.0000 | 1.9231 | 0.0000 | 0.0000 | 1 | 51 | 0 | 0 | 0 | ||
| ciseli-custom | INDEL | I6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged | homalt | 62.7651 | 58.8235 | 67.2727 | 64.5161 | 40 | 28 | 37 | 18 | 18 | 100.0000 | |
| ciseli-custom | INDEL | I6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged | * | 12.2983 | 7.6493 | 31.3559 | 74.7323 | 41 | 495 | 37 | 81 | 73 | 90.1235 | |
| ciseli-custom | INDEL | I6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged | het | 28.1655 | 19.4631 | 50.9434 | 80.0000 | 29 | 120 | 27 | 26 | 21 | 80.7692 | |
| ciseli-custom | INDEL | I6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged | hetalt | 0.0000 | 0.5510 | 0.0000 | 0.0000 | 2 | 361 | 0 | 0 | 0 | ||
| ciseli-custom | INDEL | I6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged | homalt | 22.4719 | 41.6667 | 15.3846 | 67.8218 | 10 | 14 | 10 | 55 | 52 | 94.5455 | |
| ciseli-custom | INDEL | I6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged | * | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| ciseli-custom | INDEL | I6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| ciseli-custom | INDEL | I6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| ciseli-custom | INDEL | I6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged | homalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| ciseli-custom | INDEL | I6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged | * | 16.8236 | 10.3093 | 45.7020 | 62.4933 | 360 | 3132 | 319 | 379 | 351 | 92.6121 | |
| ciseli-custom | INDEL | I6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged | het | 41.4919 | 29.6496 | 69.0852 | 68.2046 | 220 | 522 | 219 | 98 | 82 | 83.6735 | |
| ciseli-custom | INDEL | I6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged | hetalt | 0.0000 | 1.5360 | 0.0000 | 0.0000 | 39 | 2500 | 0 | 0 | 0 | ||
| ciseli-custom | INDEL | I6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged | homalt | 33.9034 | 47.8673 | 26.2467 | 55.9028 | 101 | 110 | 100 | 281 | 269 | 95.7295 | |
| ciseli-custom | INDEL | I6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged | * | 17.6716 | 10.8017 | 48.5470 | 60.1499 | 322 | 2659 | 284 | 301 | 281 | 93.3555 | |
| ciseli-custom | INDEL | I6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged | het | 44.4700 | 32.0066 | 72.8302 | 65.6291 | 193 | 410 | 193 | 72 | 61 | 84.7222 | |
| ciseli-custom | INDEL | I6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged | hetalt | 0.0000 | 1.6895 | 0.0000 | 0.0000 | 37 | 2153 | 0 | 0 | 0 | ||
| ciseli-custom | INDEL | I6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged | homalt | 35.9715 | 48.9362 | 28.4375 | 54.0890 | 92 | 96 | 91 | 229 | 220 | 96.0699 | |
| ciseli-custom | INDEL | I6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged | * | 20.1055 | 12.5225 | 50.9714 | 65.7132 | 488 | 3409 | 446 | 429 | 399 | 93.0070 | |
| ciseli-custom | INDEL | I6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged | het | 42.6673 | 30.3609 | 71.7500 | 71.1191 | 286 | 656 | 287 | 113 | 96 | 84.9558 | |
| ciseli-custom | INDEL | I6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged | hetalt | 0.0000 | 1.5129 | 0.0000 | 0.0000 | 40 | 2604 | 0 | 0 | 0 | ||
| ciseli-custom | INDEL | I6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged | homalt | 40.7567 | 52.0900 | 33.4737 | 59.2973 | 162 | 149 | 159 | 316 | 303 | 95.8861 | |
| ciseli-custom | INDEL | I6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged | * | 25.0146 | 16.3556 | 53.1570 | 69.3516 | 1034 | 5288 | 985 | 868 | 794 | 91.4747 | |
| ciseli-custom | INDEL | I6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged | het | 41.2863 | 29.3252 | 69.7259 | 75.3742 | 578 | 1393 | 585 | 254 | 203 | 79.9213 | |
| ciseli-custom | INDEL | I6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged | hetalt | 0.0000 | 1.4180 | 0.0000 | 0.0000 | 50 | 3476 | 0 | 0 | 0 | ||
| ciseli-custom | INDEL | I6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged | homalt | 43.7922 | 49.2121 | 39.4477 | 61.5764 | 406 | 419 | 400 | 614 | 591 | 96.2541 | |
| ciseli-custom | INDEL | I6_15 | lowcmp_SimpleRepeat_diTR_11to50 | * | 19.2271 | 11.7330 | 53.2189 | 75.6912 | 283 | 2129 | 248 | 218 | 182 | 83.4862 | |
| ciseli-custom | INDEL | I6_15 | lowcmp_SimpleRepeat_diTR_11to50 | het | 45.6848 | 32.5820 | 76.4151 | 81.0545 | 159 | 329 | 162 | 50 | 35 | 70.0000 | |
| ciseli-custom | INDEL | I6_15 | lowcmp_SimpleRepeat_diTR_11to50 | hetalt | 0.0000 | 2.0892 | 0.0000 | 0.0000 | 37 | 1734 | 0 | 0 | 0 | ||
| ciseli-custom | INDEL | I6_15 | lowcmp_SimpleRepeat_diTR_11to50 | homalt | 42.4438 | 56.8627 | 33.8583 | 68.1704 | 87 | 66 | 86 | 168 | 147 | 87.5000 | |
| ciseli-custom | INDEL | I6_15 | lowcmp_SimpleRepeat_diTR_51to200 | * | 2.1739 | 100.0000 | 2 | 90 | 0 | 0 | 0 | ||||
| ciseli-custom | INDEL | I6_15 | lowcmp_SimpleRepeat_diTR_51to200 | het | 11.1111 | 100.0000 | 1 | 8 | 0 | 0 | 0 | ||||
| ciseli-custom | INDEL | I6_15 | lowcmp_SimpleRepeat_diTR_51to200 | hetalt | 0.0000 | 1.2048 | 0.0000 | 0.0000 | 1 | 82 | 0 | 0 | 0 | ||
| ciseli-custom | INDEL | I6_15 | lowcmp_SimpleRepeat_diTR_51to200 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| ciseli-custom | INDEL | I6_15 | lowcmp_SimpleRepeat_homopolymer_6to10 | * | 41.7093 | 29.6774 | 70.1493 | 82.9517 | 46 | 109 | 47 | 20 | 19 | 95.0000 | |
| ciseli-custom | INDEL | I6_15 | lowcmp_SimpleRepeat_homopolymer_6to10 | het | 46.1032 | 32.2581 | 80.7692 | 87.0647 | 20 | 42 | 21 | 5 | 5 | 100.0000 | |
| ciseli-custom | INDEL | I6_15 | lowcmp_SimpleRepeat_homopolymer_6to10 | hetalt | 0.0000 | 2.2727 | 0.0000 | 0.0000 | 1 | 43 | 0 | 0 | 0 | ||
| ciseli-custom | INDEL | I6_15 | lowcmp_SimpleRepeat_homopolymer_6to10 | homalt | 56.5463 | 51.0204 | 63.4146 | 78.6458 | 25 | 24 | 26 | 15 | 14 | 93.3333 | |
| ciseli-custom | INDEL | I6_15 | lowcmp_SimpleRepeat_homopolymer_gt10 | * | 0.0000 | 100.0000 | 0 | 2 | 0 | 0 | 0 | ||||
| ciseli-custom | INDEL | I6_15 | lowcmp_SimpleRepeat_homopolymer_gt10 | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| ciseli-custom | INDEL | I6_15 | lowcmp_SimpleRepeat_homopolymer_gt10 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 2 | 0 | 0 | 0 | |||
| ciseli-custom | INDEL | I6_15 | lowcmp_SimpleRepeat_homopolymer_gt10 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| ciseli-custom | INDEL | I6_15 | lowcmp_SimpleRepeat_quadTR_11to50 | * | 26.6407 | 17.5625 | 55.1471 | 66.3088 | 232 | 1089 | 225 | 183 | 170 | 92.8962 | |
| ciseli-custom | INDEL | I6_15 | lowcmp_SimpleRepeat_quadTR_11to50 | het | 38.9082 | 26.7241 | 71.5116 | 73.2919 | 124 | 340 | 123 | 49 | 41 | 83.6735 | |
| ciseli-custom | INDEL | I6_15 | lowcmp_SimpleRepeat_quadTR_11to50 | hetalt | 0.0000 | 0.7800 | 0.0000 | 0.0000 | 5 | 636 | 0 | 0 | 0 | ||
| ciseli-custom | INDEL | I6_15 | lowcmp_SimpleRepeat_quadTR_11to50 | homalt | 45.3431 | 47.6852 | 43.2203 | 58.3774 | 103 | 113 | 102 | 134 | 129 | 96.2687 | |