PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
14301-14350 / 86044 show all
ciseli-customINDELD6_15map_l250_m2_e1*
50.0000
45.4545
55.5556
97.9167
10121082
25.0000
ciseli-customINDELD6_15map_l250_m2_e1het
38.4615
35.7143
41.6667
98.0645
59571
14.2857
ciseli-customINDELD6_15map_l250_m2_e1hetalt
0.0000
0.0000
0.0000
02000
ciseli-customINDELD6_15map_l250_m2_e1homalt
83.3333
83.3333
83.3333
97.5410
51511
100.0000
ciseli-customINDELD6_15map_siren*
62.3762
61.8861
62.8743
84.5131
31519431518697
52.1505
ciseli-customINDELD6_15map_sirenhet
69.4186
71.7857
67.2026
85.2327
2017920910221
20.5882
ciseli-customINDELD6_15map_sirenhetalt
0.0000
7.0707
0.0000
0.0000
792000
ciseli-customINDELD6_15map_sirenhomalt
66.5025
82.3077
55.7895
83.1709
107231068476
90.4762
ciseli-customINDELD6_15segdup*
68.3802
65.4450
71.5909
94.3207
125661265032
64.0000
ciseli-customINDELD6_15segduphet
78.3734
80.4348
76.4151
94.8494
741881258
32.0000
ciseli-customINDELD6_15segduphetalt
0.0000
12.2449
0.0000
0.0000
643000
ciseli-customINDELD6_15segduphomalt
75.0000
90.0000
64.2857
93.2757
455452524
96.0000
ciseli-customINDELD6_15segdupwithalt*
0.0000
100.0000
00000
ciseli-customINDELD6_15segdupwithalthet
0.0000
100.0000
00000
ciseli-customINDELD6_15segdupwithalthetalt
0.0000
0.0000
0.0000
00000
ciseli-customINDELD6_15segdupwithalthomalt
0.0000
100.0000
00000
ciseli-customINDELD6_15tech_badpromoters*
68.7500
64.7059
73.3333
53.1250
1161143
75.0000
ciseli-customINDELD6_15tech_badpromotershet
70.5882
60.0000
85.7143
58.8235
64611
100.0000
ciseli-customINDELD6_15tech_badpromotershetalt
0.0000
0.0000
0.0000
01000
ciseli-customINDELD6_15tech_badpromotershomalt
71.4286
83.3333
62.5000
46.6667
51532
66.6667
ciseli-customINDELI16_PLUS**
18.6757
11.2906
53.9910
75.8984
7205657717611525
85.9247
ciseli-customINDELI16_PLUS*het
16.1440
9.3451
59.2506
84.8956
2542464253174123
70.6897
ciseli-customINDELI16_PLUS*hetalt
0.0000
0.0477
0.0000
0.0000
12097000
ciseli-customINDELI16_PLUS*homalt
37.7444
29.7886
51.4983
66.4182
4651096464437402
91.9908
ciseli-customINDELI16_PLUSHG002complexvar*
21.4346
13.1398
58.1315
77.3688
172113716812193
76.8595
ciseli-customINDELI16_PLUSHG002complexvarhet
19.4609
11.4286
65.4867
81.3223
76589743919
48.7179
ciseli-customINDELI16_PLUSHG002complexvarhetalt
0.0000
0.2985
0.0000
0.0000
1334000
ciseli-customINDELI16_PLUSHG002complexvarhomalt
39.0246
30.7443
53.4091
73.8095
95214948274
90.2439
ciseli-customINDELI16_PLUSHG002compoundhet*
0.6022
0.3733
1.5564
60.4311
821358506462
91.3043
ciseli-customINDELI16_PLUSHG002compoundhethet
8.3916
12.7660
6.2500
77.0883
64169075
83.3333
ciseli-customINDELI16_PLUSHG002compoundhethetalt
0.0000
0.0478
0.0000
0.0000
12092000
ciseli-customINDELI16_PLUSHG002compoundhethomalt
0.9434
33.3333
0.4785
52.5000
122416387
93.0288
ciseli-customINDELI16_PLUSdecoy*
0.0000
100.0000
00000
ciseli-customINDELI16_PLUSdecoyhet
0.0000
100.0000
00000
ciseli-customINDELI16_PLUSdecoyhetalt
0.0000
0.0000
0.0000
00000
ciseli-customINDELI16_PLUSdecoyhomalt
0.0000
100.0000
00000
ciseli-customINDELI16_PLUSfunc_cds*
0.0000
100.0000
012000
ciseli-customINDELI16_PLUSfunc_cdshet
0.0000
100.0000
09000
ciseli-customINDELI16_PLUSfunc_cdshetalt
0.0000
0.0000
0.0000
01000
ciseli-customINDELI16_PLUSfunc_cdshomalt
0.0000
100.0000
02000
ciseli-customINDELI16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_merged*
18.1984
12.1359
36.3636
91.4286
25181244224
57.1429
ciseli-customINDELI16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhet
28.8000
20.0000
51.4286
92.7835
197618173
17.6471
ciseli-customINDELI16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
086000
ciseli-customINDELI16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
21.4286
24.0000
19.3548
89.1228
61962521
84.0000
ciseli-customINDELI16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ciseli-customINDELI16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ciseli-customINDELI16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
ciseli-customINDELI16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ciseli-customINDELI16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_merged*
17.4295
10.9553
42.6117
84.6357
1251016124167140
83.8323
ciseli-customINDELI16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
25.7093
16.0550
64.4860
89.9813
70366693823
60.5263