PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
14101-14150 / 86044 show all
ciseli-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
65.0000
86.6667
52.0000
85.0299
13213121
8.3333
ciseli-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
93.5617
98.6804
88.9479
75.7364
16751224167562082698
33.5255
ciseli-customSNP*lowcmp_SimpleRepeat_diTR_11to50*
78.8703
94.8102
67.5188
69.4075
918950393504498362
8.0480
ciseli-customSNP*lowcmp_SimpleRepeat_diTR_11to50het
73.8977
92.7678
61.4068
68.2562
578545159193720112
3.0108
ciseli-customSNP*lowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
0.0000
65.2174
01082
25.0000
ciseli-customSNP*lowcmp_SimpleRepeat_diTR_11to50homalt
89.3094
98.5239
81.6710
71.7637
3404513431770248
32.2078
ciseli-customSNP*lowcmp_SimpleRepeat_diTR_51to200*
16.6796
78.5714
9.3301
83.9601
339393796
1.5831
ciseli-customSNP*lowcmp_SimpleRepeat_diTR_51to200het
11.4943
74.0741
6.2305
81.1065
207203013
0.9967
ciseli-customSNP*lowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
0.0000
0.0000
00000
ciseli-customSNP*lowcmp_SimpleRepeat_diTR_51to200homalt
31.9534
86.6667
19.5876
89.3054
13219783
3.8462
ciseli-customSNP*lowcmp_SimpleRepeat_homopolymer_6to10*
96.7054
98.3117
95.1508
57.0643
1688729016875860129
15.0000
ciseli-customSNP*lowcmp_SimpleRepeat_homopolymer_6to10het
96.0994
97.6994
94.5510
57.2127
108292551084562521
3.3600
ciseli-customSNP*lowcmp_SimpleRepeat_homopolymer_6to10hetalt
90.9091
100.0000
83.3333
66.6667
50510
0.0000
ciseli-customSNP*lowcmp_SimpleRepeat_homopolymer_6to10homalt
97.8177
99.4251
96.2614
56.7778
6053356025234108
46.1538
ciseli-customSNP*lowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
100.0000
00000
ciseli-customSNP*lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
ciseli-customSNP*lowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
100.0000
00000
ciseli-customSNP*lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
ciseli-customSNP*lowcmp_SimpleRepeat_quadTR_11to50*
87.9780
97.7891
79.9560
49.1916
17781402178154466191
4.2768
ciseli-customSNP*lowcmp_SimpleRepeat_quadTR_11to50het
83.4518
96.9037
73.2793
50.2099
1107935411126405761
1.5036
ciseli-customSNP*lowcmp_SimpleRepeat_quadTR_11to50hetalt
61.5385
80.0000
50.0000
50.0000
41441
25.0000
ciseli-customSNP*lowcmp_SimpleRepeat_quadTR_11to50homalt
96.7305
99.3032
94.2877
46.8635
6698476685405129
31.8519
ciseli-customSNP*lowcmp_SimpleRepeat_quadTR_51to200*
29.4976
75.5245
18.3280
86.4488
1083511450825
4.9213
ciseli-customSNP*lowcmp_SimpleRepeat_quadTR_51to200het
25.3240
74.5098
15.2542
84.3039
7626814507
1.5556
ciseli-customSNP*lowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.0000
0.0000
00000
ciseli-customSNP*lowcmp_SimpleRepeat_quadTR_51to200homalt
49.5193
78.0488
36.2637
92.4606
329335818
31.0345
ciseli-customSNP*lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
ciseli-customSNP*lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
ciseli-customSNP*lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
ciseli-customSNP*lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
100.0000
00000
ciseli-customSNP*lowcmp_SimpleRepeat_triTR_11to50*
93.3626
97.9878
89.1544
38.6200
7207148720187661
6.9635
ciseli-customSNP*lowcmp_SimpleRepeat_triTR_11to50het
91.1740
97.0537
85.9659
38.7403
448013644907338
1.0914
ciseli-customSNP*lowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
100.0000
01000
ciseli-customSNP*lowcmp_SimpleRepeat_triTR_11to50homalt
97.2393
99.5982
94.9895
38.3851
272711271114353
37.0629
ciseli-customSNP*lowcmp_SimpleRepeat_triTR_51to200*
31.2655
77.7778
19.5652
86.4307
729372
5.4054
ciseli-customSNP*lowcmp_SimpleRepeat_triTR_51to200het
33.1034
85.7143
20.5128
82.6667
618311
3.2258
ciseli-customSNP*lowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
00000
ciseli-customSNP*lowcmp_SimpleRepeat_triTR_51to200homalt
22.2222
50.0000
14.2857
93.8596
11161
16.6667
ciseli-customSNP*lowcmp_SimpleRepeat_triTR_gt200*
0.0000
100.0000
00000
ciseli-customSNP*lowcmp_SimpleRepeat_triTR_gt200het
0.0000
0.0000
0.0000
00000
ciseli-customSNP*lowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
ciseli-customSNP*lowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
100.0000
00000
ciseli-customSNP*map_l100_m0_e0*
81.1632
76.8673
85.9677
74.4366
2524475972519841131141
27.7413
ciseli-customSNP*map_l100_m0_e0het
77.1628
71.2049
84.2088
78.9054
15099610615086282999
3.4995
ciseli-customSNP*map_l100_m0_e0hetalt
66.6667
56.2500
81.8182
78.0000
97921
50.0000
ciseli-customSNP*map_l100_m0_e0homalt
87.9778
87.2289
88.7396
61.6447
1013614841010312821041
81.2012
ciseli-customSNP*map_l100_m1_e0*
84.9995
81.6845
88.5950
70.0712
59142132615896075902012
26.5086
ciseli-customSNP*map_l100_m1_e0het
81.6533
76.9704
86.9429
74.2795
3491310446348385232159
3.0390
ciseli-customSNP*map_l100_m1_e0hetalt
71.2329
63.4146
81.2500
73.7705
26152665
83.3333
ciseli-customSNP*map_l100_m1_e0homalt
90.3629
89.6308
91.1071
60.1980
2420328002409623521848
78.5714