PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
14051-14100 / 86044 show all
ciseli-customSNP*lowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ciseli-customSNP*lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ciseli-customSNP*lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ciseli-customSNP*lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ciseli-customSNP*lowcmp_AllRepeats_lt51bp_gt95identity_merged*
88.8947
97.3720
81.7754
63.9228
5416914625435212113797
6.5797
ciseli-customSNP*lowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
85.5234
96.3184
76.9043
63.8905
3411513043433710312215
2.0850
ciseli-customSNP*lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
55.5556
76.9231
43.4783
70.8861
10310133
23.0769
ciseli-customSNP*lowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
95.3693
99.2326
91.7955
63.9797
20044155200051788579
32.3826
ciseli-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331*
82.4169
95.5954
72.4316
76.0055
4368920134398716742965
5.7640
ciseli-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331het
76.7889
93.7761
65.0122
76.1162
2692517872721814648266
1.8160
ciseli-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
65.0000
86.6667
52.0000
85.0299
13213121
8.3333
ciseli-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331homalt
93.5617
98.6804
88.9479
75.7364
16751224167562082698
33.5255
ciseli-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged*
88.5298
97.9511
80.7619
65.1199
4207884219100539
3.8806
ciseli-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhet
84.2619
97.2450
74.3373
66.4617
261274263691012
1.3187
ciseli-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
91.6667
00010
0.0000
ciseli-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
96.7044
99.1299
94.3948
61.8169
15951415839427
28.7234
ciseli-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ciseli-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ciseli-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ciseli-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ciseli-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged*
85.2279
98.0433
75.3754
62.9512
60631216073198452
2.6210
ciseli-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhet
80.5000
97.2526
68.6708
63.3133
38231083849175613
0.7403
ciseli-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
66.6667
100.0000
50.0000
86.6667
10110
0.0000
ciseli-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
94.8802
99.4227
90.7347
62.0390
223913222322739
17.1806
ciseli-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged*
85.0816
98.0660
75.1335
65.0221
3803753798125730
2.3866
ciseli-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhet
80.5908
97.1532
68.8529
65.1322
242371242510974
0.3646
ciseli-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
90.9091
10100
ciseli-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
94.3610
99.7108
89.5561
64.7005
13794137216026
16.2500
ciseli-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged*
31.2957
79.5337
19.4805
82.5076
30779315130253
4.0707
ciseli-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhet
26.2261
75.3623
15.8754
79.0455
20868214113422
1.9400
ciseli-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
80.0000
00010
0.0000
ciseli-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhomalt
53.1268
90.0000
37.6866
90.4490
991110116731
18.5629
ciseli-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ciseli-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ciseli-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ciseli-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ciseli-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged*
50.1218
86.1980
35.3337
81.4035
234237524144418249
5.6360
ciseli-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhet
42.6981
81.4626
28.9311
78.7122
14373271494367076
2.0708
ciseli-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
28.5714
50.0000
20.0000
72.2222
11140
0.0000
ciseli-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhomalt
69.8918
95.0578
55.2616
86.6554
90447919744173
23.2527
ciseli-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged*
54.8494
87.1622
40.0150
81.6424
206430421283190200
6.2696
ciseli-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhet
47.3815
82.3646
33.2564
79.3607
12472671297260357
2.1898
ciseli-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
33.3333
50.0000
25.0000
73.3333
11130
0.0000
ciseli-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhomalt
72.7873
95.7746
58.6987
85.9415
81636830584143
24.4863
ciseli-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged*
74.2906
94.9819
61.0017
81.9477
10259542103416611313
4.7345
ciseli-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhet
68.0380
93.0844
53.6124
81.3886
64074766493561890
1.6020
ciseli-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
40.0000
66.6667
28.5714
89.7059
21250
0.0000
ciseli-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhomalt
87.9595
98.3397
79.5614
83.1943
3850653846988223
22.5709
ciseli-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged*
82.4169
95.5954
72.4316
76.0055
4368920134398716742965
5.7640
ciseli-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
76.7889
93.7761
65.0122
76.1162
2692517872721814648266
1.8160