PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
13901-13950 / 86044 show all
ciseli-customSNPtvmap_l125_m0_e0*
75.4859
70.1855
81.6523
81.6008
4654197746551046265
25.3346
ciseli-customSNPtvmap_l125_m0_e0het
70.2747
63.3947
78.8298
84.9536
27901611278974926
3.4713
ciseli-customSNPtvmap_l125_m0_e0hetalt
53.3333
44.4444
66.6667
85.3659
45421
50.0000
ciseli-customSNPtvmap_l125_m0_e0homalt
85.0153
83.7461
86.3236
70.9690
18603611862295238
80.6780
ciseli-customSNPtvmap_l125_m1_e0*
79.1043
74.1571
84.7587
76.7783
118774139118732135521
24.4028
ciseli-customSNPtvmap_l125_m1_e0het
74.2570
68.0229
81.7491
80.4845
688832386889153857
3.7061
ciseli-customSNPtvmap_l125_m1_e0hetalt
71.6981
63.3333
82.6087
75.5319
19111943
75.0000
ciseli-customSNPtvmap_l125_m1_e0homalt
87.0129
84.8123
89.3307
67.3979
49708904965593461
77.7403
ciseli-customSNPtvmap_l125_m2_e0*
79.3554
74.4800
84.9139
78.4079
122814208122762181537
24.6217
ciseli-customSNPtvmap_l125_m2_e0het
74.6164
68.4639
81.9839
81.7497
714932937149157162
3.9465
ciseli-customSNPtvmap_l125_m2_e0hetalt
71.6981
63.3333
82.6087
79.2793
19111943
75.0000
ciseli-customSNPtvmap_l125_m2_e0homalt
87.1292
84.9759
89.3945
70.0273
51139045108606472
77.8878
ciseli-customSNPtvmap_l125_m2_e1*
79.4183
74.5632
84.9497
78.4301
124204237124122199540
24.5566
ciseli-customSNPtvmap_l125_m2_e1het
74.7394
68.6345
82.0365
81.7503
724333107243158664
4.0353
ciseli-customSNPtvmap_l125_m2_e1hetalt
71.6981
63.3333
82.6087
79.6460
19111943
75.0000
ciseli-customSNPtvmap_l125_m2_e1homalt
87.1141
84.9193
89.4252
70.0769
51589165150609473
77.6683
ciseli-customSNPtvmap_l150_m0_e0*
72.3723
66.6267
79.2023
86.0382
278113932780730179
24.5205
ciseli-customSNPtvmap_l150_m0_e0het
67.3971
60.2533
76.4627
88.5079
17131130171252718
3.4156
ciseli-customSNPtvmap_l150_m0_e0hetalt
33.3333
33.3333
33.3333
90.9091
12121
50.0000
ciseli-customSNPtvmap_l150_m0_e0homalt
82.2034
80.3464
84.1483
77.4538
10672611067201160
79.6020
ciseli-customSNPtvmap_l150_m1_e0*
76.2235
70.9861
82.2954
80.7468
7746316677441666387
23.2293
ciseli-customSNPtvmap_l150_m1_e0het
70.7269
64.3680
78.4799
84.0134
447124754471122646
3.7520
ciseli-customSNPtvmap_l150_m1_e0hetalt
68.5714
60.0000
80.0000
80.0000
1281232
66.6667
ciseli-customSNPtvmap_l150_m1_e0homalt
85.3488
82.6913
88.1828
71.9082
32636833261437339
77.5744
ciseli-customSNPtvmap_l150_m2_e0*
76.6548
71.4839
82.6322
82.1021
8117323881121705399
23.4018
ciseli-customSNPtvmap_l150_m2_e0het
71.3414
65.0579
78.9685
85.0033
471825344716125650
3.9809
ciseli-customSNPtvmap_l150_m2_e0hetalt
68.5714
60.0000
80.0000
82.5581
1281232
66.6667
ciseli-customSNPtvmap_l150_m2_e0homalt
85.5692
82.9537
88.3551
74.3676
33876963384446347
77.8027
ciseli-customSNPtvmap_l150_m2_e1*
76.7644
71.6136
82.7136
82.0895
8237326582301720402
23.3721
ciseli-customSNPtvmap_l150_m2_e1het
71.5152
65.2695
79.0828
84.9798
479625524794126852
4.1010
ciseli-customSNPtvmap_l150_m2_e1hetalt
68.5714
60.0000
80.0000
82.9545
1281232
66.6667
ciseli-customSNPtvmap_l150_m2_e1homalt
85.5896
82.9463
88.4069
74.3629
34297053424449348
77.5056
ciseli-customSNPtvmap_l250_m0_e0*
63.1004
58.1699
68.9441
95.6122
44532044420040
20.0000
ciseli-customSNPtvmap_l250_m0_e0het
59.1512
52.9720
66.9623
96.1499
3032693021497
4.6980
ciseli-customSNPtvmap_l250_m0_e0hetalt
0.0000
100.0000
00000
ciseli-customSNPtvmap_l250_m0_e0homalt
73.5751
73.5751
73.5751
93.4487
142511425133
64.7059
ciseli-customSNPtvmap_l250_m1_e0*
65.7644
60.3702
72.2172
91.9134
159810491596614128
20.8469
ciseli-customSNPtvmap_l250_m1_e0het
59.5668
53.4415
67.2779
93.2143
95583295446421
4.5259
ciseli-customSNPtvmap_l250_m1_e0hetalt
50.0000
50.0000
50.0000
90.4762
22222
100.0000
ciseli-customSNPtvmap_l250_m1_e0homalt
77.9222
74.8832
81.2183
87.6682
641215640148105
70.9459
ciseli-customSNPtvmap_l250_m2_e0*
66.4506
60.8258
73.2218
92.3535
175311291750640134
20.9375
ciseli-customSNPtvmap_l250_m2_e0het
60.1108
53.7113
68.2415
93.5631
1042898104048421
4.3388
ciseli-customSNPtvmap_l250_m2_e0hetalt
60.0000
60.0000
60.0000
90.7407
32322
100.0000
ciseli-customSNPtvmap_l250_m2_e0homalt
78.7009
75.5603
82.1138
88.5597
708229707154111
72.0779
ciseli-customSNPtvmap_l250_m2_e1*
66.5781
60.9396
73.3664
92.3960
177711391774644134
20.8075
ciseli-customSNPtvmap_l250_m2_e1het
60.2121
53.7913
68.3733
93.6004
1057908105548821
4.3033
ciseli-customSNPtvmap_l250_m2_e1hetalt
60.0000
60.0000
60.0000
90.9091
32322
100.0000
ciseli-customSNPtvmap_l250_m2_e1homalt
78.9120
75.7928
82.2989
88.6021
717229716154111
72.0779
ciseli-customSNPtvmap_siren*
87.3579
85.7022
89.0790
62.2878
393636567393154820974
20.2075
ciseli-customSNPtvmap_sirenhet
84.4100
82.1595
86.7874
65.3031
23505510423489357693
2.6007