PrecisionFDA
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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
| Entry | Type | Subtype | Subset | Genotype | F-score | Recall | Precision | Frac_NA | Truth TP | Truth FN | Query TP | Query FP | FP gt | % FP ma | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
13351-13400 / 86044 show all | |||||||||||||||
| ciseli-custom | INDEL | C1_5 | lowcmp_SimpleRepeat_homopolymer_gt10 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| ciseli-custom | INDEL | C1_5 | lowcmp_SimpleRepeat_quadTR_11to50 | * | 0.0000 | 0.0000 | 21.6981 | 90.8066 | 0 | 1 | 23 | 83 | 19 | 22.8916 | |
| ciseli-custom | INDEL | C1_5 | lowcmp_SimpleRepeat_quadTR_11to50 | het | 0.0000 | 0.0000 | 22.2222 | 96.8085 | 0 | 1 | 2 | 7 | 1 | 14.2857 | |
| ciseli-custom | INDEL | C1_5 | lowcmp_SimpleRepeat_quadTR_11to50 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| ciseli-custom | INDEL | C1_5 | lowcmp_SimpleRepeat_quadTR_11to50 | homalt | 0.0000 | 0.0000 | 21.6495 | 88.8634 | 0 | 0 | 21 | 76 | 18 | 23.6842 | |
| ciseli-custom | INDEL | C1_5 | lowcmp_SimpleRepeat_quadTR_51to200 | * | 0.0000 | 0.0000 | 33.3333 | 93.8776 | 0 | 0 | 3 | 6 | 1 | 16.6667 | |
| ciseli-custom | INDEL | C1_5 | lowcmp_SimpleRepeat_quadTR_51to200 | het | 0.0000 | 0.0000 | 60.0000 | 92.5373 | 0 | 0 | 3 | 2 | 0 | 0.0000 | |
| ciseli-custom | INDEL | C1_5 | lowcmp_SimpleRepeat_quadTR_51to200 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| ciseli-custom | INDEL | C1_5 | lowcmp_SimpleRepeat_quadTR_51to200 | homalt | 0.0000 | 0.0000 | 95.0000 | 0 | 0 | 0 | 4 | 1 | 25.0000 | ||
| ciseli-custom | INDEL | C1_5 | lowcmp_SimpleRepeat_quadTR_gt200 | * | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| ciseli-custom | INDEL | C1_5 | lowcmp_SimpleRepeat_quadTR_gt200 | het | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| ciseli-custom | INDEL | C1_5 | lowcmp_SimpleRepeat_quadTR_gt200 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| ciseli-custom | INDEL | C1_5 | lowcmp_SimpleRepeat_quadTR_gt200 | homalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| ciseli-custom | INDEL | C1_5 | lowcmp_SimpleRepeat_triTR_11to50 | * | 48.0000 | 100.0000 | 31.5789 | 90.0000 | 1 | 0 | 12 | 26 | 5 | 19.2308 | |
| ciseli-custom | INDEL | C1_5 | lowcmp_SimpleRepeat_triTR_11to50 | het | 40.0000 | 100.0000 | 25.0000 | 95.4545 | 1 | 0 | 1 | 3 | 0 | 0.0000 | |
| ciseli-custom | INDEL | C1_5 | lowcmp_SimpleRepeat_triTR_11to50 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| ciseli-custom | INDEL | C1_5 | lowcmp_SimpleRepeat_triTR_11to50 | homalt | 0.0000 | 0.0000 | 32.3529 | 88.3562 | 0 | 0 | 11 | 23 | 5 | 21.7391 | |
| ciseli-custom | INDEL | C1_5 | lowcmp_SimpleRepeat_triTR_51to200 | * | 0.0000 | 0.0000 | 87.5000 | 0 | 0 | 0 | 2 | 2 | 100.0000 | ||
| ciseli-custom | INDEL | C1_5 | lowcmp_SimpleRepeat_triTR_51to200 | het | 0.0000 | 0.0000 | 75.0000 | 0 | 0 | 0 | 1 | 1 | 100.0000 | ||
| ciseli-custom | INDEL | C1_5 | lowcmp_SimpleRepeat_triTR_51to200 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| ciseli-custom | INDEL | C1_5 | lowcmp_SimpleRepeat_triTR_51to200 | homalt | 0.0000 | 0.0000 | 91.6667 | 0 | 0 | 0 | 1 | 1 | 100.0000 | ||
| ciseli-custom | INDEL | C1_5 | map_l100_m0_e0 | * | 0.0000 | 0.0000 | 10.0000 | 97.7528 | 0 | 0 | 1 | 9 | 2 | 22.2222 | |
| ciseli-custom | INDEL | C1_5 | map_l100_m0_e0 | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| ciseli-custom | INDEL | C1_5 | map_l100_m0_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| ciseli-custom | INDEL | C1_5 | map_l100_m0_e0 | homalt | 0.0000 | 0.0000 | 10.0000 | 96.0784 | 0 | 0 | 1 | 9 | 2 | 22.2222 | |
| ciseli-custom | INDEL | C1_5 | map_l100_m1_e0 | * | 0.0000 | 0.0000 | 9.0909 | 97.3430 | 0 | 0 | 2 | 20 | 4 | 20.0000 | |
| ciseli-custom | INDEL | C1_5 | map_l100_m1_e0 | het | 0.0000 | 0.0000 | 33.3333 | 99.0476 | 0 | 0 | 1 | 2 | 0 | 0.0000 | |
| ciseli-custom | INDEL | C1_5 | map_l100_m1_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| ciseli-custom | INDEL | C1_5 | map_l100_m1_e0 | homalt | 0.0000 | 0.0000 | 5.2632 | 96.2963 | 0 | 0 | 1 | 18 | 4 | 22.2222 | |
| ciseli-custom | INDEL | C1_5 | map_l100_m2_e0 | * | 0.0000 | 0.0000 | 8.6957 | 97.4918 | 0 | 0 | 2 | 21 | 4 | 19.0476 | |
| ciseli-custom | INDEL | C1_5 | map_l100_m2_e0 | het | 0.0000 | 0.0000 | 33.3333 | 99.1329 | 0 | 0 | 1 | 2 | 0 | 0.0000 | |
| ciseli-custom | INDEL | C1_5 | map_l100_m2_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| ciseli-custom | INDEL | C1_5 | map_l100_m2_e0 | homalt | 0.0000 | 0.0000 | 5.0000 | 96.4974 | 0 | 0 | 1 | 19 | 4 | 21.0526 | |
| ciseli-custom | INDEL | C1_5 | map_l100_m2_e1 | * | 0.0000 | 0.0000 | 8.6957 | 97.5162 | 0 | 0 | 2 | 21 | 4 | 19.0476 | |
| ciseli-custom | INDEL | C1_5 | map_l100_m2_e1 | het | 0.0000 | 0.0000 | 33.3333 | 99.1404 | 0 | 0 | 1 | 2 | 0 | 0.0000 | |
| ciseli-custom | INDEL | C1_5 | map_l100_m2_e1 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| ciseli-custom | INDEL | C1_5 | map_l100_m2_e1 | homalt | 0.0000 | 0.0000 | 5.0000 | 96.5338 | 0 | 0 | 1 | 19 | 4 | 21.0526 | |
| ciseli-custom | INDEL | C1_5 | map_l125_m0_e0 | * | 0.0000 | 0.0000 | 20.0000 | 98.5030 | 0 | 0 | 1 | 4 | 0 | 0.0000 | |
| ciseli-custom | INDEL | C1_5 | map_l125_m0_e0 | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| ciseli-custom | INDEL | C1_5 | map_l125_m0_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| ciseli-custom | INDEL | C1_5 | map_l125_m0_e0 | homalt | 0.0000 | 0.0000 | 20.0000 | 97.4093 | 0 | 0 | 1 | 4 | 0 | 0.0000 | |
| ciseli-custom | INDEL | C1_5 | map_l125_m1_e0 | * | 0.0000 | 0.0000 | 6.2500 | 97.3899 | 0 | 0 | 1 | 15 | 2 | 13.3333 | |
| ciseli-custom | INDEL | C1_5 | map_l125_m1_e0 | het | 0.0000 | 0.0000 | 99.1803 | 0 | 0 | 0 | 2 | 0 | 0.0000 | ||
| ciseli-custom | INDEL | C1_5 | map_l125_m1_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| ciseli-custom | INDEL | C1_5 | map_l125_m1_e0 | homalt | 0.0000 | 0.0000 | 7.1429 | 96.2060 | 0 | 0 | 1 | 13 | 2 | 15.3846 | |
| ciseli-custom | INDEL | C1_5 | map_l125_m2_e0 | * | 0.0000 | 0.0000 | 5.8824 | 97.5398 | 0 | 0 | 1 | 16 | 2 | 12.5000 | |
| ciseli-custom | INDEL | C1_5 | map_l125_m2_e0 | het | 0.0000 | 0.0000 | 99.2481 | 0 | 0 | 0 | 2 | 0 | 0.0000 | ||
| ciseli-custom | INDEL | C1_5 | map_l125_m2_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| ciseli-custom | INDEL | C1_5 | map_l125_m2_e0 | homalt | 0.0000 | 0.0000 | 6.6667 | 96.4706 | 0 | 0 | 1 | 14 | 2 | 14.2857 | |
| ciseli-custom | INDEL | C1_5 | map_l125_m2_e1 | * | 0.0000 | 0.0000 | 5.8824 | 97.5540 | 0 | 0 | 1 | 16 | 2 | 12.5000 | |