PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
11451-11500 / 86044 show all
cchapple-customINDELI6_15decoyhet
0.0000
100.0000
00000
cchapple-customINDELI6_15decoyhetalt
0.0000
0.0000
0.0000
00000
cchapple-customINDELI6_15decoyhomalt
0.0000
100.0000
00000
cchapple-customINDELI6_15func_cds*
97.7008
97.6744
97.7273
35.2941
4214311
100.0000
cchapple-customINDELD16_PLUSlowcmp_SimpleRepeat_triTR_11to50het
97.8383
98.3607
97.3214
62.5418
60110933
100.0000
cchapple-customINDELD16_PLUSlowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
92.1569
0.0000
0.0000
474000
cchapple-customINDELD16_PLUSlowcmp_SimpleRepeat_triTR_11to50homalt
100.0000
100.0000
100.0000
53.6082
4504500
cchapple-customINDELD16_PLUSlowcmp_SimpleRepeat_triTR_51to200*
89.4812
86.9565
92.1569
51.8868
4064744
100.0000
cchapple-customINDELD16_PLUSlowcmp_SimpleRepeat_triTR_51to200het
83.6066
75.0000
94.4444
59.5506
623422
100.0000
cchapple-customINDELD16_PLUSlowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
84.0000
0.0000
0.0000
214000
cchapple-customINDELD16_PLUSlowcmp_SimpleRepeat_triTR_51to200homalt
92.8571
100.0000
86.6667
11.7647
1301322
100.0000
cchapple-customINDELD16_PLUSmap_l100_m0_e0*
77.9661
82.1429
74.1935
94.2056
2352381
12.5000
cchapple-customINDELD16_PLUSmap_l100_m0_e0het
83.4019
84.2105
82.6087
94.8081
1631940
0.0000
cchapple-customINDELD16_PLUSmap_l100_m0_e0hetalt
0.0000
75.0000
0.0000
0.0000
31000
cchapple-customINDELD16_PLUSmap_l100_m0_e0homalt
61.5385
80.0000
50.0000
91.3043
41441
25.0000
cchapple-customINDELD16_PLUSmap_l100_m1_e0*
79.8809
79.3103
80.4598
91.6985
691870179
52.9412
cchapple-customINDELD16_PLUSmap_l100_m1_e0het
84.8574
86.9565
82.8571
91.8320
40658127
58.3333
cchapple-customINDELD16_PLUSmap_l100_m1_e0hetalt
0.0000
65.3846
0.0000
0.0000
179000
cchapple-customINDELD16_PLUSmap_l100_m1_e0homalt
75.0000
80.0000
70.5882
91.0995
1231252
40.0000
cchapple-customINDELD16_PLUSmap_l100_m2_e0*
79.4406
78.8889
80.0000
92.4306
711972189
50.0000
cchapple-customINDELD16_PLUSmap_l100_m2_e0het
83.6445
85.4167
81.9444
92.5620
41759137
53.8462
cchapple-customINDELD16_PLUSmap_l100_m2_e0hetalt
0.0000
65.3846
0.0000
0.0000
179000
cchapple-customINDELD16_PLUSmap_l100_m2_e0homalt
76.4706
81.2500
72.2222
91.8552
1331352
40.0000
cchapple-customINDELD16_PLUSmap_l100_m2_e1*
79.6787
78.3505
81.0526
92.1811
762177189
50.0000
cchapple-customINDELD16_PLUSmap_l100_m2_e1het
84.6663
86.2745
83.1169
92.2457
44764137
53.8462
cchapple-customINDELD16_PLUSmap_l100_m2_e1hetalt
0.0000
63.3333
0.0000
0.0000
1911000
cchapple-customINDELD16_PLUSmap_l100_m2_e1homalt
76.4706
81.2500
72.2222
91.8919
1331352
40.0000
cchapple-customINDELD16_PLUSmap_l125_m0_e0*
88.8889
100.0000
80.0000
94.6429
1201230
0.0000
cchapple-customINDELD16_PLUSmap_l125_m0_e0het
86.9565
100.0000
76.9231
94.3478
901030
0.0000
cchapple-customINDELD16_PLUSmap_l125_m0_e0hetalt
0.0000
100.0000
0.0000
0.0000
10000
cchapple-customINDELD16_PLUSmap_l125_m0_e0homalt
100.0000
100.0000
100.0000
96.0000
20200
cchapple-customINDELD16_PLUSmap_l125_m1_e0*
91.2281
96.2963
86.6667
94.5055
2612640
0.0000
cchapple-customINDELD16_PLUSmap_l125_m1_e0het
89.5075
95.0000
84.6154
94.1704
1912240
0.0000
cchapple-customINDELD16_PLUSmap_l125_m1_e0hetalt
0.0000
100.0000
0.0000
0.0000
30000
cchapple-customINDELD16_PLUSmap_l125_m1_e0homalt
100.0000
100.0000
100.0000
96.0000
40400
cchapple-customINDELD16_PLUSmap_l125_m2_e0*
91.2281
96.2963
86.6667
95.1923
2612640
0.0000
cchapple-customINDELD16_PLUSmap_l125_m2_e0het
89.5075
95.0000
84.6154
94.9219
1912240
0.0000
cchapple-customINDELD16_PLUSmap_l125_m2_e0hetalt
0.0000
100.0000
0.0000
0.0000
30000
cchapple-customINDELD16_PLUSmap_l125_m2_e0homalt
100.0000
100.0000
100.0000
96.4286
40400
cchapple-customINDELD16_PLUSmap_l125_m2_e1*
89.6552
92.8571
86.6667
95.3125
2622640
0.0000
cchapple-customINDELD16_PLUSmap_l125_m2_e1het
89.5075
95.0000
84.6154
95.0570
1912240
0.0000
cchapple-customINDELD16_PLUSmap_l125_m2_e1hetalt
0.0000
75.0000
0.0000
0.0000
31000
cchapple-customINDELD16_PLUSmap_l125_m2_e1homalt
100.0000
100.0000
100.0000
96.4912
40400
cchapple-customINDELD16_PLUSmap_l150_m0_e0*
87.5000
100.0000
77.7778
95.2880
70720
0.0000
cchapple-customINDELD16_PLUSmap_l150_m0_e0het
87.5000
100.0000
77.7778
94.2308
70720
0.0000
cchapple-customINDELD16_PLUSmap_l150_m0_e0hetalt
0.0000
0.0000
0.0000
00000
cchapple-customINDELD16_PLUSmap_l150_m0_e0homalt
0.0000
100.0000
00000
cchapple-customINDELD16_PLUSmap_l150_m1_e0*
87.5000
93.3333
82.3529
95.3804
1411430
0.0000
cchapple-customINDELD16_PLUSmap_l150_m1_e0het
87.2902
92.8571
82.3529
94.3333
1311430
0.0000
cchapple-customINDELD16_PLUSmap_l150_m1_e0hetalt
0.0000
100.0000
0.0000
0.0000
10000