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Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
11301-11350 / 86044 show all
cchapple-customINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhomalt
91.1652
96.3415
86.5169
61.6379
793771212
100.0000
cchapple-customINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
cchapple-customINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
cchapple-customINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
cchapple-customINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
cchapple-customINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged*
96.9093
94.7026
99.2213
43.0691
654336666265248
92.3077
cchapple-customINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhet
97.0809
94.7303
99.5510
41.4525
15288559872723
85.1852
cchapple-customINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
0.0000
94.1037
0.0000
0.0000
4373274000
cchapple-customINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhomalt
97.5597
98.9214
96.2349
54.4582
64276392525
100.0000
cchapple-customINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged*
97.5290
95.6844
99.4462
41.4708
567625657463230
93.7500
cchapple-customINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhet
97.6384
95.7207
99.6345
39.6588
12755751801917
89.4737
cchapple-customINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
0.0000
95.1601
0.0000
0.0000
3834195000
cchapple-customINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhomalt
98.5211
99.2995
97.7547
53.9013
56745661313
100.0000
cchapple-customINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged*
97.2451
95.3502
99.2167
55.7798
801839181076458
90.6250
cchapple-customINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhet
97.7466
96.0553
99.4986
53.1009
23629769453529
82.8571
cchapple-customINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
0.0000
94.0067
0.0000
0.0000
4486286000
cchapple-customINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhomalt
98.4351
99.3209
97.5651
66.8707
1170811622929
100.0000
cchapple-customINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged*
97.9081
96.5168
99.3401
63.4667
155175601565510487
83.6538
cchapple-customINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
98.0389
96.6511
99.4672
62.4367
6205215119486447
73.4375
cchapple-customINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
0.0000
94.5047
0.0000
0.0000
5572324000
cchapple-customINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
99.1864
99.4416
98.9325
66.4187
37402137074040
100.0000
cchapple-customINDELI1_5lowcmp_SimpleRepeat_diTR_11to50*
97.8094
96.1793
99.4957
50.2286
551321955242825
89.2857
cchapple-customINDELI1_5lowcmp_SimpleRepeat_diTR_11to50het
98.4844
97.4321
99.5596
48.5952
13283549732219
86.3636
cchapple-customINDELI1_5lowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
95.4008
0.0000
0.0000
3630175000
cchapple-customINDELI1_5lowcmp_SimpleRepeat_diTR_11to50homalt
98.6628
98.4043
98.9228
61.2656
555955166
100.0000
cchapple-customINDELI1_5lowcmp_SimpleRepeat_diTR_51to200*
79.6460
66.5049
99.2593
44.6721
1376913411
100.0000
cchapple-customINDELI1_5lowcmp_SimpleRepeat_diTR_51to200het
89.4961
81.4815
99.2593
43.5146
22513411
100.0000
cchapple-customINDELI1_5lowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
64.2458
0.0000
0.0000
11564000
cchapple-customINDELI1_5lowcmp_SimpleRepeat_diTR_51to200homalt
0.0000
100.0000
00000
cchapple-customINDELI1_5lowcmp_SimpleRepeat_homopolymer_6to10*
98.9760
98.3446
99.6155
65.8661
2614442591108
80.0000
cchapple-customINDELI1_5lowcmp_SimpleRepeat_homopolymer_6to10het
99.1748
98.8355
99.5163
68.9098
135816164686
75.0000
cchapple-customINDELI1_5lowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
94.9367
0.0000
0.0000
30016000
cchapple-customINDELI1_5lowcmp_SimpleRepeat_homopolymer_6to10homalt
99.2719
98.7603
99.7888
58.8261
9561294522
100.0000
cchapple-customINDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10*
100.0000
100.0000
10000
cchapple-customINDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
cchapple-customINDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
100.0000
0.0000
0.0000
10000
cchapple-customINDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
cchapple-customINDELI1_5lowcmp_SimpleRepeat_quadTR_11to50*
98.5873
97.9738
99.2084
62.4678
38207937603027
90.0000
cchapple-customINDELI1_5lowcmp_SimpleRepeat_quadTR_11to50het
98.7388
98.0035
99.4851
62.3094
16693427051411
78.5714
cchapple-customINDELI1_5lowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
96.7286
0.0000
0.0000
109437000
cchapple-customINDELI1_5lowcmp_SimpleRepeat_quadTR_11to50homalt
98.8761
99.2488
98.5061
62.8641
1057810551616
100.0000
cchapple-customINDELI1_5lowcmp_SimpleRepeat_quadTR_51to200*
94.6263
91.4498
98.0315
68.7192
2462324952
40.0000
cchapple-customINDELI1_5lowcmp_SimpleRepeat_quadTR_51to200het
93.0465
88.2353
98.4127
67.1447
45624841
25.0000
cchapple-customINDELI1_5lowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
92.1659
0.0000
0.0000
20017000
cchapple-customINDELI1_5lowcmp_SimpleRepeat_quadTR_51to200homalt
66.6667
100.0000
50.0000
95.5556
10111
100.0000
cchapple-customINDELI1_5lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
0.0000
0.0000
00000
cchapple-customINDELI1_5lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
cchapple-customINDELI1_5lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
cchapple-customINDELI1_5lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
cchapple-customINDELI1_5lowcmp_SimpleRepeat_triTR_11to50*
99.1368
98.7619
99.5146
57.7002
103713102554
80.0000