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Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
10251-10300 / 86044 show all
cchapple-customINDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
0.0000
0.0000
100.0000
95.2000
003000
cchapple-customINDELC6_15lowcmp_SimpleRepeat_diTR_11to50*
0.0000
0.0000
88.0597
96.3106
005983
37.5000
cchapple-customINDELC6_15lowcmp_SimpleRepeat_diTR_11to50het
0.0000
0.0000
84.3137
96.6381
004383
37.5000
cchapple-customINDELC6_15lowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
0.0000
0.0000
00000
cchapple-customINDEL***
99.1388
98.8448
99.4346
57.2260
340562398036352020671592
77.0198
cchapple-customINDEL**het
99.2026
98.9188
99.4881
58.0034
19203420992388471229782
63.6290
cchapple-customINDEL**hetalt
0.0000
93.6165
0.0000
0.0000
236261611000
cchapple-customINDEL**homalt
99.5578
99.7843
99.3323
55.6558
124902270124673838810
96.6587
cchapple-customINDEL*HG002complexvar*
98.8567
98.4455
99.2713
55.5354
75742119678742578462
79.9308
cchapple-customINDEL*HG002complexvarhet
98.8709
98.5307
99.2135
57.1695
4553367952101413306
74.0920
cchapple-customINDEL*HG002complexvarhetalt
0.0000
90.1865
0.0000
0.0000
3336363000
cchapple-customINDEL*HG002complexvarhomalt
99.4073
99.4302
99.3845
51.9433
2687315426641165156
94.5455
cchapple-customINDEL*HG002compoundhet*
95.5576
93.9686
97.2012
57.1714
2815318075119114741382
93.7585
cchapple-customINDEL*HG002compoundhethet
96.8882
95.2125
98.6240
55.6229
389819650675707621
87.8359
cchapple-customINDEL*HG002compoundhethetalt
0.0000
93.6418
0.0000
0.0000
235791601000
cchapple-customINDEL*HG002compoundhethomalt
57.1228
98.5423
40.2182
82.1359
67610516767761
99.2177
cchapple-customINDEL*decoy*
100.0000
100.0000
100.0000
99.9561
1001000
cchapple-customINDEL*decoyhet
100.0000
100.0000
100.0000
99.9628
60700
cchapple-customINDEL*decoyhetalt
0.0000
100.0000
0.0000
0.0000
10000
cchapple-customINDEL*decoyhomalt
100.0000
100.0000
100.0000
99.9250
30300
cchapple-customINDEL*func_cds*
98.9926
98.8764
99.1091
40.8432
440544542
50.0000
cchapple-customINDEL*func_cdshet
98.6264
98.5981
98.6547
47.0309
211322031
33.3333
cchapple-customINDEL*func_cdshetalt
0.0000
80.0000
0.0000
0.0000
41000
cchapple-customINDEL*func_cdshomalt
99.5575
99.5575
99.5575
33.1361
225122511
100.0000
cchapple-customINDEL*lowcmp_AllRepeats_51to200bp_gt95identity_merged*
93.6951
91.3730
96.1384
58.0455
920486912448500431
86.2000
cchapple-customINDEL*lowcmp_AllRepeats_51to200bp_gt95identity_mergedhet
94.5231
92.2277
96.9357
58.1370
372631410281325271
83.3846
cchapple-customINDEL*lowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
86.5063
0.0000
0.0000
3308516000
cchapple-customINDEL*lowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
95.2958
98.2345
92.5278
57.6262
2170392167175160
91.4286
cchapple-customINDEL*lowcmp_AllRepeats_gt200bp_gt95identity_merged*
94.7368
90.0000
100.0000
99.4547
1821800
cchapple-customINDEL*lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
99.3674
1201500
cchapple-customINDEL*lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
0.0000
0.0000
30000
cchapple-customINDEL*lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
75.0000
60.0000
100.0000
99.6774
32300
cchapple-customINDEL*lowcmp_AllRepeats_lt51bp_gt95identity_merged*
98.7884
98.3155
99.2658
69.8244
928581591106946791672
84.9558
cchapple-customINDEL*lowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
98.8427
98.3427
99.3479
69.0114
4747180076325501389
77.6447
cchapple-customINDEL*lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
95.5114
0.0000
0.0000
14725692000
cchapple-customINDEL*lowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
99.3690
99.6782
99.0618
71.6714
306629930621290283
97.5862
cchapple-customINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331*
97.6609
96.7085
98.6322
60.0245
632002151784541088926
85.1103
cchapple-customINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331het
97.7409
96.6568
98.8496
59.7558
29461101960407703560
79.6586
cchapple-customINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
0.0000
93.7863
0.0000
0.0000
156671038000
cchapple-customINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331homalt
98.6906
99.4825
97.9112
60.8903
180729418047385366
95.0649
cchapple-customINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged*
97.1515
96.1503
98.1737
71.9585
20738322044132
78.0488
cchapple-customINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhet
97.1539
96.1783
98.1494
73.9632
12084814852821
75.0000
cchapple-customINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
86.8263
0.0000
0.0000
14522000
cchapple-customINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
98.2253
98.2265
98.2240
66.6515
720137191311
84.6154
cchapple-customINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
93.7500
88.2353
100.0000
99.5292
1521500
cchapple-customINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
99.4286
1001300
cchapple-customINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
0.0000
0.0000
30000
cchapple-customINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
66.6667
50.0000
100.0000
99.7805
22200
cchapple-customINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged*
99.1381
98.8474
99.4304
72.0835
50605952373024
80.0000
cchapple-customINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhet
99.0919
98.8333
99.3518
73.8158
29653533722217
77.2727