PrecisionFDA
Truth Challenge
Engage and improve DNA test results with our community challenges
Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
| Entry | Type | Subtype | Subset | Genotype | F-score | Recall | Precision | Frac_NA | Truth TP | Truth FN | Query TP | Query FP | FP gt | % FP ma | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
8451-8500 / 86044 show all | |||||||||||||||
| bgallagher-sentieon | INDEL | I16_PLUS | lowcmp_SimpleRepeat_triTR_51to200 | hetalt | 100.0000 | 100.0000 | 100.0000 | 40.0000 | 2 | 0 | 3 | 0 | 0 | ||
| bgallagher-sentieon | INDEL | I16_PLUS | lowcmp_SimpleRepeat_triTR_51to200 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| bgallagher-sentieon | INDEL | I16_PLUS | map_l100_m0_e0 | * | 91.6667 | 100.0000 | 84.6154 | 96.4088 | 11 | 0 | 11 | 2 | 0 | 0.0000 | |
| bgallagher-sentieon | INDEL | I16_PLUS | map_l100_m0_e0 | het | 94.1176 | 100.0000 | 88.8889 | 95.0000 | 8 | 0 | 8 | 1 | 0 | 0.0000 | |
| bgallagher-sentieon | INDEL | I16_PLUS | map_l100_m0_e0 | hetalt | 100.0000 | 100.0000 | 100.0000 | 87.5000 | 1 | 0 | 1 | 0 | 0 | ||
| bgallagher-sentieon | INDEL | I16_PLUS | map_l100_m0_e0 | homalt | 80.0000 | 100.0000 | 66.6667 | 98.2759 | 2 | 0 | 2 | 1 | 0 | 0.0000 | |
| bgallagher-sentieon | INDEL | I16_PLUS | map_l100_m1_e0 | * | 92.3077 | 92.3077 | 92.3077 | 95.5631 | 24 | 2 | 24 | 2 | 0 | 0.0000 | |
| bgallagher-sentieon | INDEL | I16_PLUS | map_l100_m1_e0 | het | 94.4444 | 94.4444 | 94.4444 | 94.2857 | 17 | 1 | 17 | 1 | 0 | 0.0000 | |
| bgallagher-sentieon | INDEL | I16_PLUS | map_l100_m1_e0 | hetalt | 80.0000 | 66.6667 | 100.0000 | 91.6667 | 2 | 1 | 2 | 0 | 0 | ||
| bgallagher-sentieon | INDEL | I16_PLUS | map_l100_m1_e0 | homalt | 90.9091 | 100.0000 | 83.3333 | 97.5709 | 5 | 0 | 5 | 1 | 0 | 0.0000 | |
| bgallagher-sentieon | INDEL | I16_PLUS | map_l100_m2_e0 | * | 90.5660 | 92.3077 | 88.8889 | 96.0294 | 24 | 2 | 24 | 3 | 0 | 0.0000 | |
| bgallagher-sentieon | INDEL | I16_PLUS | map_l100_m2_e0 | het | 94.4444 | 94.4444 | 94.4444 | 95.1351 | 17 | 1 | 17 | 1 | 0 | 0.0000 | |
| bgallagher-sentieon | INDEL | I16_PLUS | map_l100_m2_e0 | hetalt | 80.0000 | 66.6667 | 100.0000 | 93.5484 | 2 | 1 | 2 | 0 | 0 | ||
| bgallagher-sentieon | INDEL | I16_PLUS | map_l100_m2_e0 | homalt | 83.3333 | 100.0000 | 71.4286 | 97.4910 | 5 | 0 | 5 | 2 | 0 | 0.0000 | |
| bgallagher-sentieon | INDEL | I16_PLUS | map_l100_m2_e1 | * | 90.5660 | 92.3077 | 88.8889 | 96.0469 | 24 | 2 | 24 | 3 | 0 | 0.0000 | |
| bgallagher-sentieon | INDEL | I16_PLUS | map_l100_m2_e1 | het | 94.4444 | 94.4444 | 94.4444 | 95.1482 | 17 | 1 | 17 | 1 | 0 | 0.0000 | |
| bgallagher-sentieon | INDEL | I16_PLUS | map_l100_m2_e1 | hetalt | 80.0000 | 66.6667 | 100.0000 | 93.7500 | 2 | 1 | 2 | 0 | 0 | ||
| bgallagher-sentieon | INDEL | I16_PLUS | map_l100_m2_e1 | homalt | 83.3333 | 100.0000 | 71.4286 | 97.5000 | 5 | 0 | 5 | 2 | 0 | 0.0000 | |
| bgallagher-sentieon | INDEL | I16_PLUS | map_l125_m0_e0 | * | 85.7143 | 100.0000 | 75.0000 | 97.3422 | 6 | 0 | 6 | 2 | 0 | 0.0000 | |
| bgallagher-sentieon | INDEL | I16_PLUS | map_l125_m0_e0 | het | 85.7143 | 100.0000 | 75.0000 | 97.1831 | 3 | 0 | 3 | 1 | 0 | 0.0000 | |
| bgallagher-sentieon | INDEL | I16_PLUS | map_l125_m0_e0 | hetalt | 100.0000 | 100.0000 | 100.0000 | 83.3333 | 1 | 0 | 1 | 0 | 0 | ||
| bgallagher-sentieon | INDEL | I16_PLUS | map_l125_m0_e0 | homalt | 80.0000 | 100.0000 | 66.6667 | 98.0392 | 2 | 0 | 2 | 1 | 0 | 0.0000 | |
| bgallagher-sentieon | INDEL | I16_PLUS | map_l125_m1_e0 | * | 90.3226 | 93.3333 | 87.5000 | 96.4365 | 14 | 1 | 14 | 2 | 0 | 0.0000 | |
| bgallagher-sentieon | INDEL | I16_PLUS | map_l125_m1_e0 | het | 94.7368 | 100.0000 | 90.0000 | 95.5947 | 9 | 0 | 9 | 1 | 0 | 0.0000 | |
| bgallagher-sentieon | INDEL | I16_PLUS | map_l125_m1_e0 | hetalt | 80.0000 | 66.6667 | 100.0000 | 88.2353 | 2 | 1 | 2 | 0 | 0 | ||
| bgallagher-sentieon | INDEL | I16_PLUS | map_l125_m1_e0 | homalt | 85.7143 | 100.0000 | 75.0000 | 98.0488 | 3 | 0 | 3 | 1 | 0 | 0.0000 | |
| bgallagher-sentieon | INDEL | I16_PLUS | map_l125_m2_e0 | * | 87.5000 | 93.3333 | 82.3529 | 96.6862 | 14 | 1 | 14 | 3 | 0 | 0.0000 | |
| bgallagher-sentieon | INDEL | I16_PLUS | map_l125_m2_e0 | het | 94.7368 | 100.0000 | 90.0000 | 96.3100 | 9 | 0 | 9 | 1 | 0 | 0.0000 | |
| bgallagher-sentieon | INDEL | I16_PLUS | map_l125_m2_e0 | hetalt | 80.0000 | 66.6667 | 100.0000 | 90.4762 | 2 | 1 | 2 | 0 | 0 | ||
| bgallagher-sentieon | INDEL | I16_PLUS | map_l125_m2_e0 | homalt | 75.0000 | 100.0000 | 60.0000 | 97.7376 | 3 | 0 | 3 | 2 | 0 | 0.0000 | |
| bgallagher-sentieon | INDEL | I16_PLUS | map_l125_m2_e1 | * | 87.5000 | 93.3333 | 82.3529 | 96.6926 | 14 | 1 | 14 | 3 | 0 | 0.0000 | |
| bgallagher-sentieon | INDEL | I16_PLUS | map_l125_m2_e1 | het | 94.7368 | 100.0000 | 90.0000 | 96.3235 | 9 | 0 | 9 | 1 | 0 | 0.0000 | |
| bgallagher-sentieon | INDEL | I16_PLUS | map_l125_m2_e1 | hetalt | 80.0000 | 66.6667 | 100.0000 | 90.4762 | 2 | 1 | 2 | 0 | 0 | ||
| bgallagher-sentieon | INDEL | I16_PLUS | map_l125_m2_e1 | homalt | 75.0000 | 100.0000 | 60.0000 | 97.7376 | 3 | 0 | 3 | 2 | 0 | 0.0000 | |
| bgallagher-sentieon | INDEL | I16_PLUS | map_l150_m0_e0 | * | 80.0000 | 100.0000 | 66.6667 | 97.7186 | 4 | 0 | 4 | 2 | 0 | 0.0000 | |
| bgallagher-sentieon | INDEL | I16_PLUS | map_l150_m0_e0 | het | 80.0000 | 100.0000 | 66.6667 | 97.5806 | 2 | 0 | 2 | 1 | 0 | 0.0000 | |
| bgallagher-sentieon | INDEL | I16_PLUS | map_l150_m0_e0 | hetalt | 100.0000 | 100.0000 | 100.0000 | 75.0000 | 1 | 0 | 1 | 0 | 0 | ||
| bgallagher-sentieon | INDEL | I16_PLUS | map_l150_m0_e0 | homalt | 66.6667 | 100.0000 | 50.0000 | 98.5185 | 1 | 0 | 1 | 1 | 0 | 0.0000 | |
| bgallagher-sentieon | INDEL | I16_PLUS | map_l150_m1_e0 | * | 86.9565 | 90.9091 | 83.3333 | 96.7828 | 10 | 1 | 10 | 2 | 0 | 0.0000 | |
| bgallagher-sentieon | INDEL | I16_PLUS | map_l150_m1_e0 | het | 92.3077 | 100.0000 | 85.7143 | 96.1957 | 6 | 0 | 6 | 1 | 0 | 0.0000 | |
| bgallagher-sentieon | INDEL | I16_PLUS | map_l150_m1_e0 | hetalt | 66.6667 | 50.0000 | 100.0000 | 90.9091 | 1 | 1 | 1 | 0 | 0 | ||
| bgallagher-sentieon | INDEL | I16_PLUS | map_l150_m1_e0 | homalt | 85.7143 | 100.0000 | 75.0000 | 97.7528 | 3 | 0 | 3 | 1 | 0 | 0.0000 | |
| bgallagher-sentieon | INDEL | I16_PLUS | map_l150_m2_e0 | * | 86.9565 | 90.9091 | 83.3333 | 97.0874 | 10 | 1 | 10 | 2 | 0 | 0.0000 | |
| bgallagher-sentieon | INDEL | I16_PLUS | map_l150_m2_e0 | het | 92.3077 | 100.0000 | 85.7143 | 96.6667 | 6 | 0 | 6 | 1 | 0 | 0.0000 | |
| bgallagher-sentieon | INDEL | I16_PLUS | map_l150_m2_e0 | hetalt | 66.6667 | 50.0000 | 100.0000 | 91.6667 | 1 | 1 | 1 | 0 | 0 | ||
| bgallagher-sentieon | INDEL | I16_PLUS | map_l150_m2_e0 | homalt | 85.7143 | 100.0000 | 75.0000 | 97.8947 | 3 | 0 | 3 | 1 | 0 | 0.0000 | |
| bgallagher-sentieon | INDEL | I16_PLUS | map_l150_m2_e1 | * | 86.9565 | 90.9091 | 83.3333 | 97.1014 | 10 | 1 | 10 | 2 | 0 | 0.0000 | |
| bgallagher-sentieon | INDEL | I16_PLUS | map_l150_m2_e1 | het | 92.3077 | 100.0000 | 85.7143 | 96.6825 | 6 | 0 | 6 | 1 | 0 | 0.0000 | |
| bgallagher-sentieon | INDEL | I16_PLUS | map_l150_m2_e1 | hetalt | 66.6667 | 50.0000 | 100.0000 | 91.6667 | 1 | 1 | 1 | 0 | 0 | ||
| bgallagher-sentieon | INDEL | I16_PLUS | map_l150_m2_e1 | homalt | 85.7143 | 100.0000 | 75.0000 | 97.9058 | 3 | 0 | 3 | 1 | 0 | 0.0000 | |