PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
84201-84250 / 86044 show all
rpoplin-dv42SNPtvlowcmp_SimpleRepeat_quadTR_gt200*
0.0000
0.0000
0.0000
00000
rpoplin-dv42SNPtvlowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
rpoplin-dv42SNPtvlowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42SNPtvlowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42SNPtvlowcmp_SimpleRepeat_triTR_11to50*
99.9420
99.9130
99.9710
37.2906
34473344311
100.0000
rpoplin-dv42SNPtvlowcmp_SimpleRepeat_triTR_11to50het
99.9532
99.9532
99.9531
38.2523
21371213311
100.0000
rpoplin-dv42SNPtvlowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
100.0000
01000
rpoplin-dv42SNPtvlowcmp_SimpleRepeat_triTR_11to50homalt
99.9618
99.9237
100.0000
35.5315
13101131000
rpoplin-dv42SNPtvlowcmp_SimpleRepeat_triTR_51to200*
100.0000
100.0000
100.0000
98.5507
10100
rpoplin-dv42SNPtvlowcmp_SimpleRepeat_triTR_51to200het
100.0000
100.0000
100.0000
98.0392
10100
rpoplin-dv42SNPtvlowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42SNPtvlowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
100.0000
00000
rpoplin-dv42SNPtvlowcmp_SimpleRepeat_triTR_gt200*
0.0000
0.0000
0.0000
00000
rpoplin-dv42SNPtvlowcmp_SimpleRepeat_triTR_gt200het
0.0000
0.0000
0.0000
00000
rpoplin-dv42SNPtvlowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42SNPtvlowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42SNPtvmap_l100_m0_e0*
98.7643
98.7911
98.7375
67.3276
109501341094914063
45.0000
rpoplin-dv42SNPtvmap_l100_m0_e0het
98.5640
98.8507
98.2789
68.7061
713983713812550
40.0000
rpoplin-dv42SNPtvmap_l100_m0_e0hetalt
91.4286
100.0000
84.2105
84.6774
1601633
100.0000
rpoplin-dv42SNPtvmap_l100_m0_e0homalt
99.1768
98.6739
99.6848
64.1086
37955137951210
83.3333
rpoplin-dv42SNPtvmap_l100_m1_e0*
99.2751
99.2204
99.3298
64.0760
243101912430616480
48.7805
rpoplin-dv42SNPtvmap_l100_m1_e0het
99.1180
99.1503
99.0858
64.8238
152861311528214159
41.8440
rpoplin-dv42SNPtvmap_l100_m1_e0hetalt
96.4706
100.0000
93.1818
83.5821
4104133
100.0000
rpoplin-dv42SNPtvmap_l100_m1_e0homalt
99.5567
99.3365
99.7779
62.4922
89836089832018
90.0000
rpoplin-dv42SNPtvmap_l100_m2_e0*
99.2885
99.2370
99.3401
66.0825
248421912483816580
48.4848
rpoplin-dv42SNPtvmap_l100_m2_e0het
99.1350
99.1697
99.1004
66.6194
156461311564214259
41.5493
rpoplin-dv42SNPtvmap_l100_m2_e0hetalt
96.5517
100.0000
93.3333
85.0993
4204233
100.0000
rpoplin-dv42SNPtvmap_l100_m2_e0homalt
99.5649
99.3488
99.7820
64.8909
91546091542018
90.0000
rpoplin-dv42SNPtvmap_l100_m2_e1*
99.2936
99.2446
99.3427
66.1225
250921912508816680
48.1928
rpoplin-dv42SNPtvmap_l100_m2_e1het
99.1406
99.1781
99.1032
66.6722
158071311580314359
41.2587
rpoplin-dv42SNPtvmap_l100_m2_e1hetalt
96.6292
100.0000
93.4783
84.9673
4304333
100.0000
rpoplin-dv42SNPtvmap_l100_m2_e1homalt
99.5691
99.3550
99.7841
64.9074
92426092422018
90.0000
rpoplin-dv42SNPtvmap_l125_m0_e0*
98.4900
98.3713
98.6090
73.3113
652310865229252
56.5217
rpoplin-dv42SNPtvmap_l125_m0_e0het
98.3333
98.5458
98.1217
74.3380
43376443368343
51.8072
rpoplin-dv42SNPtvmap_l125_m0_e0hetalt
85.7143
100.0000
75.0000
88.4615
90933
100.0000
rpoplin-dv42SNPtvmap_l125_m0_e0homalt
98.8647
98.0189
99.7251
70.7294
217744217766
100.0000
rpoplin-dv42SNPtvmap_l125_m1_e0*
99.1341
99.0072
99.2613
68.8884
158571591585511869
58.4746
rpoplin-dv42SNPtvmap_l125_m1_e0het
98.9777
98.9729
98.9825
69.6562
100221041002010354
52.4272
rpoplin-dv42SNPtvmap_l125_m1_e0hetalt
95.2381
100.0000
90.9091
84.5794
3003033
100.0000
rpoplin-dv42SNPtvmap_l125_m1_e0homalt
99.4262
99.0614
99.7937
67.2577
58055558051212
100.0000
rpoplin-dv42SNPtvmap_l125_m2_e0*
99.1468
99.0175
99.2763
70.8786
163271621632511970
58.8235
rpoplin-dv42SNPtvmap_l125_m2_e0het
98.9943
98.9849
99.0036
71.3714
103361061033410455
52.8846
rpoplin-dv42SNPtvmap_l125_m2_e0hetalt
95.2381
100.0000
90.9091
86.5854
3003033
100.0000
rpoplin-dv42SNPtvmap_l125_m2_e0homalt
99.4329
99.0693
99.7991
69.7738
59615659611212
100.0000
rpoplin-dv42SNPtvmap_l125_m2_e1*
99.1554
99.0274
99.2837
70.9387
164951621649311970
58.8235
rpoplin-dv42SNPtvmap_l125_m2_e1het
99.0048
98.9955
99.0141
71.4321
104471061044510455
52.8846
rpoplin-dv42SNPtvmap_l125_m2_e1hetalt
95.2381
100.0000
90.9091
86.6397
3003033
100.0000
rpoplin-dv42SNPtvmap_l125_m2_e1homalt
99.4382
99.0780
99.8010
69.8334
60185660181212
100.0000
rpoplin-dv42SNPtvmap_l150_m0_e0*
98.0795
97.8917
98.2680
78.2094
40868840857245
62.5000
rpoplin-dv42SNPtvmap_l150_m0_e0het
97.9824
98.2413
97.7249
78.7694
27935027926538
58.4615