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Explore HG002 comparison results
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Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
49501-49550 / 86044 show all
ghariani-varprowlINDELI1_5**
89.9389
88.6296
91.2876
58.9415
133532171311334041273211050
86.7892
ghariani-varprowlINDELI1_5*het
92.7410
98.8133
87.3718
65.8570
78102938781201129110122
89.6466
ghariani-varprowlINDELI1_5*hetalt
0.0000
0.7861
0.0000
0.0000
8811107000
ghariani-varprowlINDELI1_5*homalt
94.4302
91.5834
97.4597
39.6857
553425086552841441928
64.3997
ghariani-varprowlINDELI1_5HG002complexvar*
92.9673
92.2577
93.6879
54.6199
3077925833065020651585
76.7554
ghariani-varprowlINDELI1_5HG002complexvarhet
95.0596
98.1636
92.1459
60.4443
178543341783315201222
80.3947
ghariani-varprowlINDELI1_5HG002complexvarhetalt
0.0000
2.8389
0.0000
0.0000
491677000
ghariani-varprowlINDELI1_5HG002complexvarhomalt
95.8338
95.7466
95.9213
42.3182
1287657212817545363
66.6055
ghariani-varprowlINDELI1_5HG002compoundhet*
10.6218
8.4898
14.1837
70.9227
104911307103362506046
96.7360
ghariani-varprowlINDELI1_5HG002compoundhethet
21.0205
76.7059
12.1791
72.5111
65219872151995126
98.5959
ghariani-varprowlINDELI1_5HG002compoundhethetalt
0.0000
0.7873
0.0000
0.0000
8811089000
ghariani-varprowlINDELI1_5HG002compoundhethomalt
36.8099
93.9210
22.8907
61.1792
309203121051920
87.5357
ghariani-varprowlINDELI1_5decoy*
0.0000
100.0000
00000
ghariani-varprowlINDELI1_5decoyhet
0.0000
100.0000
00000
ghariani-varprowlINDELI1_5decoyhetalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELI1_5decoyhomalt
0.0000
100.0000
00000
ghariani-varprowlINDELI1_5func_cds*
94.1828
94.4444
93.9227
43.4375
17010170117
63.6364
ghariani-varprowlINDELI1_5func_cdshet
90.3226
94.9153
86.1538
58.3333
5635696
66.6667
ghariani-varprowlINDELI1_5func_cdshetalt
0.0000
0.0000
0.0000
02000
ghariani-varprowlINDELI1_5func_cdshomalt
97.0213
95.7983
98.2759
29.2683
114511421
50.0000
ghariani-varprowlINDELI1_5lowcmp_AllRepeats_51to200bp_gt95identity_merged*
51.6840
41.4224
68.7044
73.6538
7631079753343297
86.5889
ghariani-varprowlINDELI1_5lowcmp_AllRepeats_51to200bp_gt95identity_mergedhet
74.8352
86.7069
65.8228
74.0520
57488572297264
88.8889
ghariani-varprowlINDELI1_5lowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
0.8919
0.0000
0.0000
8889000
ghariani-varprowlINDELI1_5lowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
70.9804
63.9576
79.7357
72.0099
1811021814633
71.7391
ghariani-varprowlINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
01000
ghariani-varprowlINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ghariani-varprowlINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
01000
ghariani-varprowlINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ghariani-varprowlINDELI1_5lowcmp_AllRepeats_lt51bp_gt95identity_merged*
65.9654
55.6526
80.9698
74.3202
86696908863320291680
82.7994
ghariani-varprowlINDELI1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
85.8876
95.4769
78.0488
76.6109
5826276585616471442
87.5531
ghariani-varprowlINDELI1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
0.9431
0.0000
0.0000
565882000
ghariani-varprowlINDELI1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
83.1025
78.7956
87.9076
66.5360
27877502777382238
62.3037
ghariani-varprowlINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331*
63.8421
54.7304
76.5939
75.6642
87997278877026802299
85.7836
ghariani-varprowlINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331het
81.6774
94.4237
71.9631
77.4935
6062358607823682066
87.2466
ghariani-varprowlINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
0.0000
0.6615
0.0000
0.0000
395857000
ghariani-varprowlINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331homalt
79.6846
71.7362
89.6138
68.4553
269810632692312233
74.6795
ghariani-varprowlINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged*
82.0780
79.3651
84.9829
70.4935
5001304988877
87.5000
ghariani-varprowlINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhet
88.7492
96.2428
82.3383
73.2890
333133317164
90.1408
ghariani-varprowlINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
084000
ghariani-varprowlINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
86.9792
83.5000
90.7609
61.7464
167331671713
76.4706
ghariani-varprowlINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
01000
ghariani-varprowlINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ghariani-varprowlINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
01000
ghariani-varprowlINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ghariani-varprowlINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged*
86.5974
85.2531
87.9848
76.9339
11622011157158144
91.1392
ghariani-varprowlINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhet
91.3272
98.3182
85.2643
79.7078
76013758131122
93.1298
ghariani-varprowlINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
0.0000
1.7857
0.0000
0.0000
2110000
ghariani-varprowlINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
88.3912
83.6820
93.6620
67.7273
400783992722
81.4815
ghariani-varprowlINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged*
88.0250
87.1204
88.9485
79.8268
83212382910398
95.1456
ghariani-varprowlINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhet
91.8644
98.7250
85.8954
82.3891
54275428985
95.5056