PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
48551-48600 / 86044 show all
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
0.0000
0.0000
0491000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_diTR_51to200homalt
10.3896
5.6338
66.6667
80.6452
467420
0.0000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_diTR_gt200*
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_diTR_gt200het
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_homopolymer_6to10*
97.1108
97.1608
97.0609
55.5769
2463972024636746544
72.9223
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_homopolymer_6to10het
98.0582
99.4990
96.6586
57.2289
146967414695508335
65.9449
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
0.9732
0.0000
0.0000
4407000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_homopolymer_6to10homalt
97.6568
97.6518
97.6619
52.8575
99392399941238209
87.8151
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
100.0000
01000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
0.0000
0.0000
01000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_quadTR_11to50*
76.4899
74.2821
78.8329
50.1539
88213054880823652266
95.8140
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_quadTR_11to50het
84.7836
98.6301
74.3463
50.8169
662492662522862211
96.7192
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
0.5358
0.0000
0.0000
81485000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_quadTR_11to50homalt
73.7755
59.7109
96.5075
47.3586
2189147721837955
69.6203
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_quadTR_51to200*
33.0811
28.3279
39.7508
61.8410
349883351532502
94.3609
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_quadTR_51to200het
55.0794
89.0909
39.8618
59.0952
34342346522495
94.8276
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.1538
0.0000
0.0000
1649000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_quadTR_51to200homalt
4.7170
2.5381
33.3333
92.1875
51925107
70.0000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
100.0000
00000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_triTR_11to50*
79.6213
77.5816
81.7711
43.7436
31639143158704666
94.6023
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_triTR_11to50het
86.3814
98.9059
76.6723
45.1991
2260252258687651
94.7598
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
0.4329
0.0000
0.0000
2460000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_triTR_11to50homalt
80.1595
67.7444
98.1461
38.4977
9014299001715
88.2353
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_triTR_51to200*
18.8065
16.0000
22.8070
67.0520
1263134441
93.1818
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_triTR_51to200het
36.5768
92.3077
22.8070
64.5963
121134441
93.1818
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
049000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
100.0000
013000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_triTR_gt200*
0.0000
100.0000
00000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_triTR_gt200het
0.0000
100.0000
00000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELD1_5map_l100_m0_e0*
90.5391
95.3650
86.1780
88.0700
8234082313224
18.1818
ghariani-varprowlINDELD1_5map_l100_m0_e0het
89.8148
98.4772
82.5532
89.6186
582958212322
17.8862
ghariani-varprowlINDELD1_5map_l100_m0_e0hetalt
0.0000
0.0000
0.0000
014000
ghariani-varprowlINDELD1_5map_l100_m0_e0homalt
94.8819
93.4109
96.4000
79.4069
2411724192
22.2222
ghariani-varprowlINDELD1_5map_l100_m1_e0*
91.4375
94.4805
88.5845
86.5571
1746102174622565
28.8889
ghariani-varprowlINDELD1_5map_l100_m1_e0het
91.4439
99.0074
84.9539
88.4423
119712119721263
29.7170
ghariani-varprowlINDELD1_5map_l100_m1_e0hetalt
0.0000
0.0000
0.0000
047000
ghariani-varprowlINDELD1_5map_l100_m1_e0homalt
95.1473
92.7365
97.6868
77.2562
54943549132
15.3846
ghariani-varprowlINDELD1_5map_l100_m2_e0*
91.5803
94.5692
88.7745
87.1803
1811104181122965
28.3843
ghariani-varprowlINDELD1_5map_l100_m2_e0het
91.5991
98.9650
85.2538
88.9688
124313124321563
29.3023
ghariani-varprowlINDELD1_5map_l100_m2_e0hetalt
0.0000
0.0000
0.0000
048000
ghariani-varprowlINDELD1_5map_l100_m2_e0homalt
95.2221
92.9624
97.5945
78.4125
56843568142
14.2857