PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
76651-76700 / 86044 show all
ndellapenna-hhgaSNP*map_l125_m0_e0het
98.3855
97.2047
99.5955
74.1909
12310354123105023
46.0000
ndellapenna-hhgaSNP*map_l125_m0_e0hetalt
87.5000
77.7778
100.0000
86.5385
72700
ndellapenna-hhgaSNP*map_l125_m0_e0homalt
99.5815
99.2700
99.8951
66.7961
666349666376
85.7143
ndellapenna-hhgaSNP*map_l125_m1_e0*
99.1686
98.5527
99.7922
67.5463
44671656446719349
52.6882
ndellapenna-hhgaSNP*map_l125_m1_e0het
98.8381
97.9748
99.7168
68.7996
27817575278177936
45.5696
ndellapenna-hhgaSNP*map_l125_m1_e0hetalt
90.9091
83.3333
100.0000
79.1667
2552500
ndellapenna-hhgaSNP*map_l125_m1_e0homalt
99.7333
99.5504
99.9169
65.2026
1682976168291413
92.8571
ndellapenna-hhgaSNP*map_l125_m2_e0*
99.1850
98.5896
99.7877
69.4898
46064659460649849
50.0000
ndellapenna-hhgaSNP*map_l125_m2_e0het
98.8614
98.0285
99.7086
70.3185
28740578287408436
42.8571
ndellapenna-hhgaSNP*map_l125_m2_e0hetalt
90.9091
83.3333
100.0000
82.3944
2552500
ndellapenna-hhgaSNP*map_l125_m2_e0homalt
99.7405
99.5626
99.9191
67.9668
1729976172991413
92.8571
ndellapenna-hhgaSNP*map_l125_m2_e1*
99.1837
98.5869
99.7877
69.5422
46535667465359949
49.4949
ndellapenna-hhgaSNP*map_l125_m2_e1het
98.8584
98.0229
99.7083
70.3755
29054586290548536
42.3529
ndellapenna-hhgaSNP*map_l125_m2_e1hetalt
90.9091
83.3333
100.0000
82.5175
2552500
ndellapenna-hhgaSNP*map_l125_m2_e1homalt
99.7429
99.5665
99.9199
68.0072
1745676174561413
92.8571
ndellapenna-hhgaSNP*map_l150_m0_e0*
98.5596
97.5316
99.6095
77.4194
11735297117354622
47.8261
ndellapenna-hhgaSNP*map_l150_m0_e0het
98.0583
96.6751
99.4816
79.2753
767626476764017
42.5000
ndellapenna-hhgaSNP*map_l150_m0_e0hetalt
100.0000
100.0000
100.0000
93.1818
30300
ndellapenna-hhgaSNP*map_l150_m0_e0homalt
99.5215
99.1930
99.8523
72.7346
405633405665
83.3333
ndellapenna-hhgaSNP*map_l150_m1_e0*
99.0061
98.2783
99.7447
72.1099
30082527300827740
51.9481
ndellapenna-hhgaSNP*map_l150_m1_e0het
98.6191
97.6082
99.6512
73.3059
18854462188546630
45.4545
ndellapenna-hhgaSNP*map_l150_m1_e0hetalt
88.8889
80.0000
100.0000
82.9787
1641600
ndellapenna-hhgaSNP*map_l150_m1_e0homalt
99.6799
99.4589
99.9020
69.8014
1121261112121110
90.9091
ndellapenna-hhgaSNP*map_l150_m2_e0*
99.0356
98.3329
99.7484
73.8523
31321531313217940
50.6329
ndellapenna-hhgaSNP*map_l150_m2_e0het
98.6606
97.6854
99.6554
74.6307
19667466196676830
44.1176
ndellapenna-hhgaSNP*map_l150_m2_e0hetalt
88.8889
80.0000
100.0000
85.7143
1641600
ndellapenna-hhgaSNP*map_l150_m2_e0homalt
99.6916
99.4786
99.9056
72.3853
1163861116381110
90.9091
ndellapenna-hhgaSNP*map_l150_m2_e1*
99.0401
98.3421
99.7481
73.9108
31676534316768040
50.0000
ndellapenna-hhgaSNP*map_l150_m2_e1het
98.6659
97.6968
99.6544
74.7044
19894469198946930
43.4783
ndellapenna-hhgaSNP*map_l150_m2_e1hetalt
88.8889
80.0000
100.0000
85.8407
1641600
ndellapenna-hhgaSNP*map_l150_m2_e1homalt
99.6950
99.4842
99.9066
72.4121
1176661117661110
90.9091
ndellapenna-hhgaSNP*map_l250_m0_e0*
97.4261
95.7377
99.1752
91.7964
2044912044178
47.0588
ndellapenna-hhgaSNP*map_l250_m0_e0het
96.7742
94.6215
99.0271
92.2359
1425811425145
35.7143
ndellapenna-hhgaSNP*map_l250_m0_e0hetalt
0.0000
100.0000
00000
ndellapenna-hhgaSNP*map_l250_m0_e0homalt
98.9608
98.4102
99.5177
90.5327
6191061933
100.0000
ndellapenna-hhgaSNP*map_l250_m1_e0*
98.0684
96.6630
99.5153
86.9145
698124169813419
55.8824
ndellapenna-hhgaSNP*map_l250_m1_e0het
97.4601
95.6257
99.3663
87.5048
454720845472914
48.2759
ndellapenna-hhgaSNP*map_l250_m1_e0hetalt
66.6667
50.0000
100.0000
95.4545
22200
ndellapenna-hhgaSNP*map_l250_m1_e0homalt
99.2653
98.7414
99.7948
85.6165
243231243255
100.0000
ndellapenna-hhgaSNP*map_l250_m2_e0*
98.1811
96.8675
99.5309
87.5400
763824776383619
52.7778
ndellapenna-hhgaSNP*map_l250_m2_e0het
97.5992
95.8799
99.3814
87.8462
498021449803114
45.1613
ndellapenna-hhgaSNP*map_l250_m2_e0hetalt
75.0000
60.0000
100.0000
94.6429
32300
ndellapenna-hhgaSNP*map_l250_m2_e0homalt
99.3266
98.8459
99.8120
86.8985
265531265555
100.0000
ndellapenna-hhgaSNP*map_l250_m2_e1*
98.1855
96.8824
99.5241
87.6224
773824977383719
51.3514
ndellapenna-hhgaSNP*map_l250_m2_e1het
97.6025
95.8967
99.3701
87.9415
504821650483214
43.7500
ndellapenna-hhgaSNP*map_l250_m2_e1hetalt
75.0000
60.0000
100.0000
94.6429
32300
ndellapenna-hhgaSNP*map_l250_m2_e1homalt
99.3346
98.8595
99.8143
86.9517
268731268755
100.0000
ndellapenna-hhgaSNP*map_siren*
99.5283
99.1937
99.8651
53.0102
145049117914505119689
45.4082
ndellapenna-hhgaSNP*map_sirenhet
99.3524
98.8878
99.8214
53.1990
8997910128998016158
36.0248
ndellapenna-hhgaSNP*map_sirenhetalt
93.5065
88.8889
98.6301
75.8278
7297211
100.0000