PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
75101-75150 / 86044 show all
mlin-fermikitSNPtvmap_l100_m2_e0hetalt
57.6271
40.4762
100.0000
71.6667
17251700
mlin-fermikitSNPtvmap_l100_m2_e0homalt
72.0127
66.5183
78.4964
53.5791
61293085612916791592
94.8183
mlin-fermikitSNPtvmap_l100_m2_e1*
71.2430
59.3165
89.1725
57.7345
14997102861498918201600
87.9121
mlin-fermikitSNPtvmap_l100_m2_e1het
70.6499
55.0822
98.4842
60.7475
8779715987711352
1.4815
mlin-fermikitSNPtvmap_l100_m2_e1hetalt
59.0164
41.8605
100.0000
70.9677
18251800
mlin-fermikitSNPtvmap_l100_m2_e1homalt
72.1476
66.6523
78.6303
53.6694
62003102620016851598
94.8368
mlin-fermikitSNPtvmap_l125_m0_e0*
51.6639
38.2748
79.4606
60.5371
253840932534655574
87.6336
mlin-fermikitSNPtvmap_l125_m0_e0het
48.9678
32.6289
98.0822
65.3700
143629651432280
0.0000
mlin-fermikitSNPtvmap_l125_m0_e0hetalt
0.0000
100.0000
09000
mlin-fermikitSNPtvmap_l125_m0_e0homalt
55.7975
49.6173
63.7363
55.1608
110211191102627574
91.5470
mlin-fermikitSNPtvmap_l125_m1_e0*
61.8003
48.5452
85.0126
58.2565
77758241777113701205
87.9562
mlin-fermikitSNPtvmap_l125_m1_e0het
60.2787
43.5216
98.0187
62.6103
440757194403891
1.1236
mlin-fermikitSNPtvmap_l125_m1_e0hetalt
46.1538
30.0000
100.0000
68.9655
921900
mlin-fermikitSNPtvmap_l125_m1_e0homalt
63.9810
57.3208
72.3922
52.9173
33592501335912811204
93.9891
mlin-fermikitSNPtvmap_l125_m2_e0*
62.7919
49.6210
85.4813
62.5997
81828307817813891218
87.6890
mlin-fermikitSNPtvmap_l125_m2_e0het
61.4279
44.7328
98.0050
66.8730
467157714667951
1.0526
mlin-fermikitSNPtvmap_l125_m2_e0hetalt
46.1538
30.0000
100.0000
76.3158
921900
mlin-fermikitSNPtvmap_l125_m2_e0homalt
64.7739
58.2018
73.0192
57.0520
35022515350212941217
94.0495
mlin-fermikitSNPtvmap_l125_m2_e1*
62.9750
49.8289
85.5434
62.7659
83008357829614021229
87.6605
mlin-fermikitSNPtvmap_l125_m2_e1het
61.6520
44.9730
97.9955
67.0300
474658074742971
1.0309
mlin-fermikitSNPtvmap_l125_m2_e1hetalt
46.1538
30.0000
100.0000
76.9231
921900
mlin-fermikitSNPtvmap_l125_m2_e1homalt
64.9030
58.3635
73.0928
57.1933
35452529354513051228
94.0996
mlin-fermikitSNPtvmap_l150_m0_e0*
46.6065
33.3972
77.1018
65.0425
139427801394414356
85.9903
mlin-fermikitSNPtvmap_l150_m0_e0het
43.5638
28.0338
97.6716
69.5976
7972046797190
0.0000
mlin-fermikitSNPtvmap_l150_m0_e0hetalt
0.0000
100.0000
03000
mlin-fermikitSNPtvmap_l150_m0_e0homalt
51.4655
44.9548
60.1815
60.0161
597731597395356
90.1266
mlin-fermikitSNPtvmap_l150_m1_e0*
56.0020
42.3295
82.7209
62.1223
461962934615964841
87.2407
mlin-fermikitSNPtvmap_l150_m1_e0het
53.4835
36.7982
97.8528
67.3388
255643902552560
0.0000
mlin-fermikitSNPtvmap_l150_m1_e0hetalt
46.1538
30.0000
100.0000
68.4211
614600
mlin-fermikitSNPtvmap_l150_m1_e0homalt
59.5283
52.1287
69.3761
55.9108
205718892057908841
92.6211
mlin-fermikitSNPtvmap_l150_m2_e0*
57.2030
43.5755
83.2323
66.6536
494864074944996869
87.2490
mlin-fermikitSNPtvmap_l150_m2_e0het
54.9832
38.2239
97.9130
71.6136
277244802768590
0.0000
mlin-fermikitSNPtvmap_l150_m2_e0hetalt
46.1538
30.0000
100.0000
73.9130
614600
mlin-fermikitSNPtvmap_l150_m2_e0homalt
60.3616
53.1472
69.8423
60.3244
217019132170937869
92.7428
mlin-fermikitSNPtvmap_l150_m2_e1*
57.3730
43.7750
83.2258
66.7620
5035646750311014885
87.2781
mlin-fermikitSNPtvmap_l150_m2_e1het
55.1935
38.4322
97.8827
71.7300
282445242820610
0.0000
mlin-fermikitSNPtvmap_l150_m2_e1hetalt
46.1538
30.0000
100.0000
75.0000
614600
mlin-fermikitSNPtvmap_l150_m2_e1homalt
60.4772
53.3382
69.8227
60.3864
220519292205953885
92.8646
mlin-fermikitSNPtvmap_l250_m0_e0*
37.7799
25.3595
74.0458
82.9427
1945711946860
88.2353
mlin-fermikitSNPtvmap_l250_m0_e0het
33.2370
20.1049
95.8333
85.2399
11545711550
0.0000
mlin-fermikitSNPtvmap_l250_m0_e0hetalt
0.0000
100.0000
00000
mlin-fermikitSNPtvmap_l250_m0_e0homalt
47.1642
40.9326
55.6338
80.3051
79114796360
95.2381
mlin-fermikitSNPtvmap_l250_m1_e0*
43.4641
30.3362
76.6221
76.8295
8031844803245216
88.1633
mlin-fermikitSNPtvmap_l250_m1_e0het
40.2130
25.3497
97.2103
81.1869
4531334453130
0.0000
mlin-fermikitSNPtvmap_l250_m1_e0hetalt
0.0000
100.0000
04000
mlin-fermikitSNPtvmap_l250_m1_e0homalt
48.6787
40.8879
60.1375
71.4985
350506350232216
93.1034
mlin-fermikitSNPtvmap_l250_m2_e0*
45.2311
31.9223
77.5717
80.1107
9201962920266237
89.0977
mlin-fermikitSNPtvmap_l250_m2_e0het
41.9263
26.7010
97.5518
84.3317
5181422518130
0.0000
mlin-fermikitSNPtvmap_l250_m2_e0hetalt
0.0000
100.0000
05000
mlin-fermikitSNPtvmap_l250_m2_e0homalt
50.5025
42.9029
61.3740
74.4739
402535402253237
93.6759