PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
72451-72500 / 86044 show all
ltrigg-rtg2SNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ltrigg-rtg2INDELD6_15map_l125_m1_e0*
97.8166
95.7265
100.0000
85.7516
112510900
ltrigg-rtg2INDELD6_15map_l125_m1_e0het
97.6000
95.3125
100.0000
86.7391
6136100
ltrigg-rtg2INDELD6_15map_l125_m1_e0hetalt
97.2973
94.7368
100.0000
87.7698
1811700
ltrigg-rtg2INDELD6_15map_l125_m1_e0homalt
98.5075
97.0588
100.0000
81.3253
3313100
ltrigg-rtg2INDELD6_15map_l125_m2_e0*
97.9757
96.0317
100.0000
85.9206
121511700
ltrigg-rtg2INDELD6_15map_l125_m2_e0het
97.8417
95.7746
100.0000
86.7063
6836700
ltrigg-rtg2INDELD6_15map_l125_m2_e0hetalt
97.2973
94.7368
100.0000
88.5135
1811700
ltrigg-rtg2INDELD6_15map_l125_m2_e0homalt
98.5915
97.2222
100.0000
81.5642
3513300
ltrigg-rtg2INDELD6_15map_l125_m2_e1*
97.6000
95.3125
100.0000
86.1340
122611800
ltrigg-rtg2INDELD6_15map_l125_m2_e1het
97.8417
95.7746
100.0000
86.9650
6836700
ltrigg-rtg2INDELD6_15map_l125_m2_e1hetalt
94.7368
90.0000
100.0000
88.8158
1821700
ltrigg-rtg2INDELD6_15map_l125_m2_e1homalt
98.6301
97.2973
100.0000
81.6216
3613400
ltrigg-rtg2INDELD6_15map_l150_m0_e0*
100.0000
100.0000
100.0000
90.6158
3203200
ltrigg-rtg2INDELD6_15map_l150_m0_e0het
100.0000
100.0000
100.0000
90.1961
2002000
ltrigg-rtg2INDELD6_15map_l150_m0_e0hetalt
100.0000
100.0000
100.0000
92.0635
50500
ltrigg-rtg2INDELD6_15map_l150_m0_e0homalt
100.0000
100.0000
100.0000
90.5405
70700
ltrigg-rtg2INDELD6_15map_l150_m1_e0*
99.3103
98.6301
100.0000
87.8840
7217100
ltrigg-rtg2INDELD6_15map_l150_m1_e0het
100.0000
100.0000
100.0000
89.0141
3903900
ltrigg-rtg2INDELD6_15map_l150_m1_e0hetalt
100.0000
100.0000
100.0000
92.0000
80800
ltrigg-rtg2INDELD6_15map_l150_m1_e0homalt
98.0392
96.1538
100.0000
81.6794
2512400
ltrigg-rtg2INDELD6_15map_l150_m2_e0*
99.3865
98.7805
100.0000
87.6755
8117900
ltrigg-rtg2INDELD6_15map_l150_m2_e0het
100.0000
100.0000
100.0000
88.2507
4604500
ltrigg-rtg2INDELD6_15map_l150_m2_e0hetalt
100.0000
100.0000
100.0000
92.6606
80800
ltrigg-rtg2INDELD6_15map_l150_m2_e0homalt
98.1818
96.4286
100.0000
82.5503
2712600
ltrigg-rtg2INDELD6_15map_l150_m2_e1*
98.8095
97.6471
100.0000
87.6900
8328100
ltrigg-rtg2INDELD6_15map_l150_m2_e1het
100.0000
100.0000
100.0000
88.2653
4704600
ltrigg-rtg2INDELD6_15map_l150_m2_e1hetalt
94.1176
88.8889
100.0000
92.8571
81800
ltrigg-rtg2INDELD6_15map_l150_m2_e1homalt
98.2456
96.5517
100.0000
82.4675
2812700
ltrigg-rtg2INDELD6_15map_l250_m0_e0*
100.0000
100.0000
100.0000
96.5909
60600
ltrigg-rtg2INDELD6_15map_l250_m0_e0het
100.0000
100.0000
100.0000
96.0784
40400
ltrigg-rtg2INDELD6_15map_l250_m0_e0hetalt
0.0000
100.0000
00000
ltrigg-rtg2INDELD6_15map_l250_m0_e0homalt
100.0000
100.0000
100.0000
94.7368
20200
ltrigg-rtg2INDELD6_15map_l250_m1_e0*
100.0000
100.0000
100.0000
94.1558
1801800
ltrigg-rtg2INDELD6_15map_l250_m1_e0het
100.0000
100.0000
100.0000
94.1176
1101100
ltrigg-rtg2INDELD6_15map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
96.5517
20200
ltrigg-rtg2INDELD6_15map_l250_m1_e0homalt
100.0000
100.0000
100.0000
92.0635
50500
ltrigg-rtg2INDELD6_15map_l250_m2_e0*
100.0000
100.0000
100.0000
93.4659
2202300
ltrigg-rtg2INDELD6_15map_l250_m2_e0het
100.0000
100.0000
100.0000
92.9245
1401500
ltrigg-rtg2INDELD6_15map_l250_m2_e0hetalt
100.0000
100.0000
100.0000
96.9231
20200
ltrigg-rtg2INDELD6_15map_l250_m2_e0homalt
100.0000
100.0000
100.0000
92.0000
60600
ltrigg-rtg2INDELD6_15map_l250_m2_e1*
100.0000
100.0000
100.0000
93.6639
2202300
ltrigg-rtg2INDELD6_15map_l250_m2_e1het
100.0000
100.0000
100.0000
93.1507
1401500
ltrigg-rtg2INDELD6_15map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
96.9697
20200
ltrigg-rtg2INDELD6_15map_l250_m2_e1homalt
100.0000
100.0000
100.0000
92.3077
60600
ltrigg-rtg2INDELD6_15map_siren*
97.4111
96.4637
98.3773
78.8139
4911848580
0.0000
ltrigg-rtg2INDELD6_15map_sirenhet
97.4910
97.5000
97.4820
79.8988
273727170
0.0000
ltrigg-rtg2INDELD6_15map_sirenhetalt
96.8750
93.9394
100.0000
80.5139
9369100
ltrigg-rtg2INDELD6_15map_sirenhomalt
97.6500
96.1538
99.1935
74.0042
125512310
0.0000
ltrigg-rtg2INDELD6_15segdup*
97.8692
96.8586
98.9011
91.2793
185618020
0.0000