PrecisionFDA
Truth Challenge
Engage and improve DNA test results with our community challenges
Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
| Entry | Type | Subtype | Subset | Genotype | F-score | Recall | Precision | Frac_NA | Truth TP | Truth FN | Query TP | Query FP | FP gt | % FP ma | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
72151-72200 / 86044 show all | |||||||||||||||
| ltrigg-rtg2 | INDEL | I6_15 | map_l125_m2_e0 | homalt | 100.0000 | 100.0000 | 100.0000 | 84.2105 | 15 | 0 | 15 | 0 | 0 | ||
| ltrigg-rtg2 | INDEL | I6_15 | map_l125_m2_e1 | * | 95.0495 | 90.5660 | 100.0000 | 88.0519 | 48 | 5 | 46 | 0 | 0 | ||
| ltrigg-rtg2 | INDEL | I6_15 | map_l125_m2_e1 | het | 90.9091 | 83.3333 | 100.0000 | 87.3016 | 25 | 5 | 24 | 0 | 0 | ||
| ltrigg-rtg2 | INDEL | I6_15 | map_l125_m2_e1 | hetalt | 100.0000 | 100.0000 | 100.0000 | 92.7835 | 8 | 0 | 7 | 0 | 0 | ||
| ltrigg-rtg2 | INDEL | I6_15 | map_l125_m2_e1 | homalt | 100.0000 | 100.0000 | 100.0000 | 84.8485 | 15 | 0 | 15 | 0 | 0 | ||
| ltrigg-rtg2 | INDEL | I6_15 | map_l150_m0_e0 | * | 85.7143 | 75.0000 | 100.0000 | 94.1748 | 6 | 2 | 6 | 0 | 0 | ||
| ltrigg-rtg2 | INDEL | I6_15 | map_l150_m0_e0 | het | 66.6667 | 50.0000 | 100.0000 | 95.7447 | 2 | 2 | 2 | 0 | 0 | ||
| ltrigg-rtg2 | INDEL | I6_15 | map_l150_m0_e0 | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| ltrigg-rtg2 | INDEL | I6_15 | map_l150_m0_e0 | homalt | 100.0000 | 100.0000 | 100.0000 | 84.6154 | 4 | 0 | 4 | 0 | 0 | ||
| ltrigg-rtg2 | INDEL | I6_15 | map_l150_m1_e0 | * | 91.3043 | 84.0000 | 100.0000 | 91.3223 | 21 | 4 | 21 | 0 | 0 | ||
| ltrigg-rtg2 | INDEL | I6_15 | map_l150_m1_e0 | het | 84.6154 | 73.3333 | 100.0000 | 90.9836 | 11 | 4 | 11 | 0 | 0 | ||
| ltrigg-rtg2 | INDEL | I6_15 | map_l150_m1_e0 | hetalt | 100.0000 | 100.0000 | 100.0000 | 95.4545 | 3 | 0 | 3 | 0 | 0 | ||
| ltrigg-rtg2 | INDEL | I6_15 | map_l150_m1_e0 | homalt | 100.0000 | 100.0000 | 100.0000 | 87.0370 | 7 | 0 | 7 | 0 | 0 | ||
| ltrigg-rtg2 | INDEL | I6_15 | map_l150_m2_e0 | * | 91.3043 | 84.0000 | 100.0000 | 92.5267 | 21 | 4 | 21 | 0 | 0 | ||
| ltrigg-rtg2 | INDEL | I6_15 | map_l150_m2_e0 | het | 84.6154 | 73.3333 | 100.0000 | 91.8519 | 11 | 4 | 11 | 0 | 0 | ||
| ltrigg-rtg2 | INDEL | I6_15 | map_l150_m2_e0 | hetalt | 100.0000 | 100.0000 | 100.0000 | 96.1039 | 3 | 0 | 3 | 0 | 0 | ||
| ltrigg-rtg2 | INDEL | I6_15 | map_l150_m2_e0 | homalt | 100.0000 | 100.0000 | 100.0000 | 89.8551 | 7 | 0 | 7 | 0 | 0 | ||
| ltrigg-rtg2 | INDEL | I6_15 | map_l150_m2_e1 | * | 92.0000 | 85.1852 | 100.0000 | 92.0962 | 23 | 4 | 23 | 0 | 0 | ||
| ltrigg-rtg2 | INDEL | I6_15 | map_l150_m2_e1 | het | 85.7143 | 75.0000 | 100.0000 | 91.3669 | 12 | 4 | 12 | 0 | 0 | ||
| ltrigg-rtg2 | INDEL | I6_15 | map_l150_m2_e1 | hetalt | 100.0000 | 100.0000 | 100.0000 | 96.2025 | 3 | 0 | 3 | 0 | 0 | ||
| ltrigg-rtg2 | INDEL | I6_15 | map_l150_m2_e1 | homalt | 100.0000 | 100.0000 | 100.0000 | 89.0411 | 8 | 0 | 8 | 0 | 0 | ||
| ltrigg-rtg2 | INDEL | I6_15 | map_l250_m0_e0 | * | 100.0000 | 100.0000 | 100.0000 | 98.0392 | 1 | 0 | 1 | 0 | 0 | ||
| ltrigg-rtg2 | INDEL | I6_15 | map_l250_m0_e0 | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| ltrigg-rtg2 | INDEL | I6_15 | map_l250_m0_e0 | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| ltrigg-rtg2 | INDEL | I6_15 | map_l250_m0_e0 | homalt | 100.0000 | 100.0000 | 100.0000 | 92.8571 | 1 | 0 | 1 | 0 | 0 | ||
| ltrigg-rtg2 | INDEL | I6_15 | map_l250_m1_e0 | * | 83.3333 | 71.4286 | 100.0000 | 95.9016 | 5 | 2 | 5 | 0 | 0 | ||
| ltrigg-rtg2 | INDEL | I6_15 | map_l250_m1_e0 | het | 66.6667 | 50.0000 | 100.0000 | 96.5517 | 2 | 2 | 2 | 0 | 0 | ||
| ltrigg-rtg2 | INDEL | I6_15 | map_l250_m1_e0 | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| ltrigg-rtg2 | INDEL | I6_15 | map_l250_m1_e0 | homalt | 100.0000 | 100.0000 | 100.0000 | 88.4615 | 3 | 0 | 3 | 0 | 0 | ||
| ltrigg-rtg2 | INDEL | I6_15 | map_l250_m2_e0 | * | 85.7143 | 75.0000 | 100.0000 | 95.6522 | 6 | 2 | 6 | 0 | 0 | ||
| ltrigg-rtg2 | INDEL | I6_15 | map_l250_m2_e0 | het | 75.0000 | 60.0000 | 100.0000 | 95.4545 | 3 | 2 | 3 | 0 | 0 | ||
| ltrigg-rtg2 | INDEL | I6_15 | map_l250_m2_e0 | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| ltrigg-rtg2 | INDEL | I6_15 | map_l250_m2_e0 | homalt | 100.0000 | 100.0000 | 100.0000 | 90.0000 | 3 | 0 | 3 | 0 | 0 | ||
| ltrigg-rtg2 | INDEL | I6_15 | map_l250_m2_e1 | * | 85.7143 | 75.0000 | 100.0000 | 95.8621 | 6 | 2 | 6 | 0 | 0 | ||
| ltrigg-rtg2 | INDEL | I6_15 | map_l250_m2_e1 | het | 75.0000 | 60.0000 | 100.0000 | 95.5882 | 3 | 2 | 3 | 0 | 0 | ||
| ltrigg-rtg2 | INDEL | I6_15 | map_l250_m2_e1 | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| ltrigg-rtg2 | INDEL | I6_15 | map_l250_m2_e1 | homalt | 100.0000 | 100.0000 | 100.0000 | 90.6250 | 3 | 0 | 3 | 0 | 0 | ||
| ltrigg-rtg2 | INDEL | I6_15 | map_siren | * | 96.2876 | 93.7705 | 98.9437 | 78.2708 | 286 | 19 | 281 | 3 | 2 | 66.6667 | |
| ltrigg-rtg2 | INDEL | I6_15 | map_siren | het | 96.3922 | 93.7063 | 99.2366 | 78.1667 | 134 | 9 | 130 | 1 | 0 | 0.0000 | |
| ltrigg-rtg2 | INDEL | I6_15 | map_siren | hetalt | 94.8905 | 90.2778 | 100.0000 | 81.4085 | 65 | 7 | 66 | 0 | 0 | ||
| ltrigg-rtg2 | INDEL | I6_15 | map_siren | homalt | 97.1812 | 96.6667 | 97.7011 | 75.2841 | 87 | 3 | 85 | 2 | 2 | 100.0000 | |
| ltrigg-rtg2 | INDEL | I6_15 | segdup | * | 98.5505 | 97.7143 | 99.4012 | 90.2624 | 171 | 4 | 166 | 1 | 1 | 100.0000 | |
| ltrigg-rtg2 | INDEL | I6_15 | segdup | het | 98.1509 | 97.5904 | 98.7179 | 90.0383 | 81 | 2 | 77 | 1 | 1 | 100.0000 | |
| ltrigg-rtg2 | INDEL | I6_15 | segdup | hetalt | 100.0000 | 100.0000 | 100.0000 | 91.5058 | 45 | 0 | 44 | 0 | 0 | ||
| ltrigg-rtg2 | INDEL | I6_15 | segdup | homalt | 97.8261 | 95.7447 | 100.0000 | 89.1304 | 45 | 2 | 45 | 0 | 0 | ||
| ltrigg-rtg2 | INDEL | I6_15 | segdupwithalt | * | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| ltrigg-rtg2 | INDEL | I6_15 | segdupwithalt | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| ltrigg-rtg2 | INDEL | I6_15 | segdupwithalt | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| ltrigg-rtg2 | INDEL | I6_15 | segdupwithalt | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| ltrigg-rtg2 | INDEL | I6_15 | tech_badpromoters | * | 100.0000 | 100.0000 | 100.0000 | 56.6667 | 13 | 0 | 13 | 0 | 0 | ||