PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
70251-70300 / 86044 show all
ltrigg-rtg1INDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged*
0.0000
0.0000
99.1379
95.9126
0011510
0.0000
ltrigg-rtg1INDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhet
0.0000
0.0000
97.8723
95.2284
004610
0.0000
ltrigg-rtg1INDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
100.0000
95.5609
005500
ltrigg-rtg1INDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhomalt
0.0000
0.0000
100.0000
97.7199
001400
ltrigg-rtg1INDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged*
0.0000
0.0000
96.7742
96.1376
0015050
0.0000
ltrigg-rtg1INDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhet
0.0000
0.0000
93.9394
95.6117
006240
0.0000
ltrigg-rtg1INDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
0.0000
0.0000
100.0000
95.9898
006300
ltrigg-rtg1INDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhomalt
0.0000
0.0000
96.1538
97.2281
002510
0.0000
ltrigg-rtg1INDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged*
0.0000
0.0000
94.5055
95.8693
01258153
20.0000
ltrigg-rtg1INDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
0.0000
0.0000
91.2000
95.3943
01114110
0.0000
ltrigg-rtg1INDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
0.0000
0.0000
97.8495
95.9740
009122
100.0000
ltrigg-rtg1INDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
0.0000
0.0000
96.3636
96.5300
005321
50.0000
ltrigg-rtg1INDELC1_5lowcmp_SimpleRepeat_diTR_11to50*
0.0000
0.0000
99.3827
95.6800
0016110
0.0000
ltrigg-rtg1INDELC1_5lowcmp_SimpleRepeat_diTR_11to50het
0.0000
0.0000
98.2759
95.7757
005710
0.0000
ltrigg-rtg1INDELC1_5lowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
0.0000
100.0000
95.1542
007700
ltrigg-rtg1INDELC1_5lowcmp_SimpleRepeat_diTR_11to50homalt
0.0000
0.0000
100.0000
96.5736
002700
ltrigg-rtg1INDELC1_5lowcmp_SimpleRepeat_diTR_51to200*
0.0000
0.0000
100.0000
97.5000
00200
ltrigg-rtg1INDELC1_5lowcmp_SimpleRepeat_diTR_51to200het
0.0000
0.0000
100.0000
92.8571
00100
ltrigg-rtg1INDELC1_5lowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
100.0000
00000
ltrigg-rtg1INDELC1_5lowcmp_SimpleRepeat_diTR_51to200homalt
0.0000
0.0000
100.0000
91.6667
00100
ltrigg-rtg1INDELC1_5lowcmp_SimpleRepeat_homopolymer_6to10*
97.7778
100.0000
95.6522
99.1174
102210
0.0000
ltrigg-rtg1INDELC1_5lowcmp_SimpleRepeat_homopolymer_6to10het
94.7368
100.0000
90.0000
99.2260
10910
0.0000
ltrigg-rtg1INDELC1_5lowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
0.0000
100.0000
99.0706
00500
ltrigg-rtg1INDELC1_5lowcmp_SimpleRepeat_homopolymer_6to10homalt
0.0000
0.0000
100.0000
98.9691
00800
ltrigg-rtg1INDELC1_5lowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
0.0000
100.0000
99.9815
00100
ltrigg-rtg1INDELC1_5lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
ltrigg-rtg1INDELC1_5lowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
0.0000
100.0000
99.9367
00100
ltrigg-rtg1INDELC1_5lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
ltrigg-rtg1INDELC1_5lowcmp_SimpleRepeat_quadTR_11to50*
0.0000
0.0000
87.5000
93.7853
0177110
0.0000
ltrigg-rtg1INDELC1_5lowcmp_SimpleRepeat_quadTR_11to50het
0.0000
0.0000
77.2727
93.3735
0134100
0.0000
ltrigg-rtg1INDELC1_5lowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
0.0000
100.0000
94.7242
002200
ltrigg-rtg1INDELC1_5lowcmp_SimpleRepeat_quadTR_11to50homalt
0.0000
0.0000
95.4545
93.4328
002110
0.0000
ltrigg-rtg1INDELC1_5lowcmp_SimpleRepeat_quadTR_51to200*
0.0000
0.0000
60.0000
95.5357
00322
100.0000
ltrigg-rtg1INDELC1_5lowcmp_SimpleRepeat_quadTR_51to200het
0.0000
0.0000
100.0000
94.7368
00200
ltrigg-rtg1INDELC1_5lowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.0000
50.0000
96.9231
00111
100.0000
ltrigg-rtg1INDELC1_5lowcmp_SimpleRepeat_quadTR_51to200homalt
0.0000
0.0000
88.8889
00011
100.0000
ltrigg-rtg1INDELC1_5lowcmp_SimpleRepeat_triTR_11to50*
100.0000
100.0000
100.0000
94.3750
102700
ltrigg-rtg1INDELC1_5lowcmp_SimpleRepeat_triTR_11to50het
100.0000
100.0000
100.0000
95.9391
10800
ltrigg-rtg1INDELC1_5lowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
0.0000
100.0000
91.8239
001300
ltrigg-rtg1INDELC1_5lowcmp_SimpleRepeat_triTR_11to50homalt
0.0000
0.0000
100.0000
95.1613
00600
ltrigg-rtg1INDELC1_5lowcmp_SimpleRepeat_triTR_51to200*
0.0000
100.0000
00000
ltrigg-rtg1INDELC1_5lowcmp_SimpleRepeat_triTR_51to200het
0.0000
100.0000
00000
ltrigg-rtg1INDELC1_5lowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
100.0000
00000
ltrigg-rtg1INDELC1_5lowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
0.0000
0.0000
00000
ltrigg-rtg1INDELC1_5map_l100_m0_e0*
0.0000
0.0000
100.0000
97.4441
00800
ltrigg-rtg1INDELC1_5map_l100_m0_e0het
0.0000
0.0000
100.0000
97.8102
00300
ltrigg-rtg1INDELC1_5map_l100_m0_e0hetalt
0.0000
0.0000
100.0000
96.1538
00200
ltrigg-rtg1INDELC1_5map_l100_m0_e0homalt
0.0000
0.0000
100.0000
97.5806
00300
ltrigg-rtg1INDELC1_5map_l100_m1_e0*
0.0000
0.0000
100.0000
96.8563
002100
ltrigg-rtg1INDELC1_5map_l100_m1_e0het
0.0000
0.0000
100.0000
96.0784
001200