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Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
68301-68350 / 86044 show all
jpowers-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
0.0000
0.0000
0.0000
015000
jpowers-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331homalt
96.2176
99.5759
93.0785
81.7232
5400235406402172
42.7861
jpowers-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged*
98.5827
98.8772
98.2900
65.3261
1321151322238
34.7826
jpowers-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhet
98.5344
98.2456
98.8249
66.8743
84015841100
0.0000
jpowers-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
98.6667
100.0000
97.3684
62.2901
4810481138
61.5385
jpowers-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
jpowers-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
jpowers-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
jpowers-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged*
98.3384
99.1260
97.5632
72.9162
21551921625414
25.9259
jpowers-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhet
98.2113
98.7743
97.6546
73.0305
1370171374331
3.0303
jpowers-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
01000
jpowers-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
98.6230
99.8728
97.4042
72.7150
78517882113
61.9048
jpowers-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged*
98.4234
99.3750
97.4898
76.6883
143191437377
18.9189
jpowers-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhet
98.1120
99.2341
97.0149
76.5207
9077910281
3.5714
jpowers-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
01000
jpowers-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
99.0596
99.8095
98.3209
76.9759
524152796
66.6667
jpowers-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged*
83.2757
88.4848
78.6458
93.1794
146191514112
29.2683
jpowers-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhet
86.2220
86.2903
86.1538
93.2079
10717112181
5.5556
jpowers-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhomalt
75.7282
95.1220
62.9032
93.1188
392392311
47.8261
jpowers-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
jpowers-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
jpowers-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
jpowers-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged*
88.5010
94.0928
83.5366
90.4222
133884137027090
33.3333
jpowers-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhet
89.4819
91.2377
87.7925
91.7885
833808631205
4.1667
jpowers-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
02000
jpowers-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhomalt
86.9634
99.6055
77.1689
87.2477
505250715085
56.6667
jpowers-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged*
89.1155
94.7826
84.0878
89.9821
119966122623279
34.0517
jpowers-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhet
89.8707
91.9395
87.8929
91.5916
730647551044
3.8462
jpowers-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
02000
jpowers-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhomalt
88.0374
100.0000
78.6311
86.1918
469047112875
58.5938
jpowers-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged*
94.8920
97.4192
92.4926
87.6892
40391074078331106
32.0242
jpowers-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhet
95.1757
96.1815
94.1907
88.8007
254410125781596
3.7736
jpowers-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
03000
jpowers-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhomalt
94.4879
99.7997
89.7129
85.3011
149531500172100
58.1395
jpowers-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged*
90.7947
97.9343
84.6254
85.1417
14270301143222602202
7.7633
jpowers-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
87.8581
97.1203
80.2087
86.4645
88702638916220030
1.3636
jpowers-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
0.0000
0.0000
0.0000
015000
jpowers-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
96.2176
99.5759
93.0785
81.7232
5400235406402172
42.7861
jpowers-varprowlSNPtvlowcmp_SimpleRepeat_diTR_11to50*
96.0601
97.7965
94.3842
73.9824
47491074790285109
38.2456
jpowers-varprowlSNPtvlowcmp_SimpleRepeat_diTR_11to50het
96.2010
96.5997
95.8055
76.3827
298310530151324
3.0303
jpowers-varprowlSNPtvlowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
0.0000
0.0000
01000
jpowers-varprowlSNPtvlowcmp_SimpleRepeat_diTR_11to50homalt
95.8422
99.9434
92.0643
68.8076
176611775153105
68.6275
jpowers-varprowlSNPtvlowcmp_SimpleRepeat_diTR_51to200*
82.3529
80.7692
84.0000
97.6258
2152140
0.0000
jpowers-varprowlSNPtvlowcmp_SimpleRepeat_diTR_51to200het
76.4706
76.4706
76.4706
97.8454
1341340
0.0000
jpowers-varprowlSNPtvlowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlSNPtvlowcmp_SimpleRepeat_diTR_51to200homalt
94.1176
88.8889
100.0000
96.9697
81800