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Explore HG002 comparison results
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Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
67701-67750 / 86044 show all
jpowers-varprowlINDELI1_5**
89.2914
86.7586
91.9765
55.5394
130714199501305911139211025
96.7784
jpowers-varprowlINDELI1_5*het
91.4249
95.2000
87.9379
62.1984
752473794752591032310077
97.6170
jpowers-varprowlINDELI1_5*hetalt
0.0000
0.6699
0.0000
0.0000
7511120000
jpowers-varprowlINDELI1_5*homalt
94.7762
91.6661
98.1046
39.3198
553925036553321069948
88.6810
jpowers-varprowlINDELI1_5HG002complexvar*
92.7158
90.8192
94.6934
52.3150
3030030633017516911600
94.6186
jpowers-varprowlINDELI1_5HG002complexvarhet
94.3417
95.4478
93.2609
57.7585
173618281734012531221
97.4461
jpowers-varprowlINDELI1_5HG002complexvarhetalt
0.0000
2.5492
0.0000
0.0000
441682000
jpowers-varprowlINDELI1_5HG002complexvarhomalt
96.2923
95.8879
96.7001
41.8106
1289555312835438379
86.5297
jpowers-varprowlINDELI1_5HG002compoundhet*
10.3239
8.1742
14.0078
68.9924
101011346100161456014
97.8682
jpowers-varprowlINDELI1_5HG002compoundhethet
20.5402
73.6471
11.9344
70.4320
62622469150995074
99.5097
jpowers-varprowlINDELI1_5HG002compoundhethetalt
0.0000
0.6710
0.0000
0.0000
7511102000
jpowers-varprowlINDELI1_5HG002compoundhethomalt
36.7720
93.9210
22.8614
60.8545
309203101046940
89.8662
jpowers-varprowlINDELI1_5decoy*
0.0000
100.0000
00000
jpowers-varprowlINDELI1_5decoyhet
0.0000
100.0000
00000
jpowers-varprowlINDELI1_5decoyhetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELI1_5decoyhomalt
0.0000
100.0000
00000
jpowers-varprowlINDELI1_5func_cds*
94.9438
93.8889
96.0227
35.7664
1691116977
100.0000
jpowers-varprowlINDELI1_5func_cdshet
91.6667
93.2203
90.1639
47.4138
5545566
100.0000
jpowers-varprowlINDELI1_5func_cdshetalt
0.0000
0.0000
0.0000
02000
jpowers-varprowlINDELI1_5func_cdshomalt
97.4359
95.7983
99.1304
27.2152
114511411
100.0000
jpowers-varprowlINDELI1_5lowcmp_AllRepeats_51to200bp_gt95identity_merged*
48.9503
37.9479
68.9379
70.3682
6991143688310289
93.2258
jpowers-varprowlINDELI1_5lowcmp_AllRepeats_51to200bp_gt95identity_mergedhet
70.8686
77.1903
65.5039
70.0927
511151507267258
96.6292
jpowers-varprowlINDELI1_5lowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
0.7804
0.0000
0.0000
7890000
jpowers-varprowlINDELI1_5lowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
71.4004
63.9576
80.8036
71.2821
1811021814331
72.0930
jpowers-varprowlINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
01000
jpowers-varprowlINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
jpowers-varprowlINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
01000
jpowers-varprowlINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
jpowers-varprowlINDELI1_5lowcmp_AllRepeats_lt51bp_gt95identity_merged*
64.7210
53.4249
82.0746
70.9149
83227255829218111705
94.1469
jpowers-varprowlINDELI1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
83.7981
89.6100
78.6942
72.7931
5468634549614881452
97.5806
jpowers-varprowlINDELI1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
0.7747
0.0000
0.0000
465892000
jpowers-varprowlINDELI1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
84.2056
79.3893
89.6441
65.5967
28087292796323253
78.3282
jpowers-varprowlINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331*
61.8393
51.5519
77.2561
71.5347
82887789826124322302
94.6546
jpowers-varprowlINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331het
78.6552
86.4019
72.1833
72.7812
5547873556121432067
96.4536
jpowers-varprowlINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
0.0000
0.5767
0.0000
0.0000
345862000
jpowers-varprowlINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331homalt
80.1154
71.9755
90.3312
67.7249
270710542700289235
81.3149
jpowers-varprowlINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged*
81.2115
77.3016
85.5379
66.6471
4871434858276
92.6829
jpowers-varprowlINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhet
87.3821
92.4855
82.8125
68.7551
320263186663
95.4545
jpowers-varprowlINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
084000
jpowers-varprowlINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
87.2063
83.5000
91.2568
61.1465
167331671613
81.2500
jpowers-varprowlINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
01000
jpowers-varprowlINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
jpowers-varprowlINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
01000
jpowers-varprowlINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
jpowers-varprowlINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged*
85.5631
82.9787
88.3137
74.1798
11312321126149144
96.6443
jpowers-varprowlINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhet
89.6491
94.3079
85.4289
76.7105
72944727124122
98.3871
jpowers-varprowlINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
0.0000
1.7857
0.0000
0.0000
2110000
jpowers-varprowlINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
88.5874
83.6820
94.1038
66.9782
400783992522
88.0000
jpowers-varprowlINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged*
86.8788
84.7120
89.1593
77.2464
8091468069898
100.0000
jpowers-varprowlINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhet
90.0260
94.5355
85.9272
79.6359
519305198585
100.0000