PrecisionFDA
Truth Challenge
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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
| Entry | Type | Subtype | Subset | Genotype | F-score | Recall | Precision | Frac_NA | Truth TP | Truth FN | Query TP | Query FP | FP gt | % FP ma | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
67001-67050 / 86044 show all | |||||||||||||||
| jpowers-varprowl | INDEL | D6_15 | map_l150_m0_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 5 | 0 | 0 | 0 | |||
| jpowers-varprowl | INDEL | D6_15 | map_l150_m0_e0 | homalt | 92.3077 | 85.7143 | 100.0000 | 92.2078 | 6 | 1 | 6 | 0 | 0 | ||
| jpowers-varprowl | INDEL | D6_15 | map_l150_m1_e0 | * | 81.6901 | 79.4521 | 84.0580 | 91.6566 | 58 | 15 | 58 | 11 | 11 | 100.0000 | |
| jpowers-varprowl | INDEL | D6_15 | map_l150_m1_e0 | het | 86.3636 | 97.4359 | 77.5510 | 92.9191 | 38 | 1 | 38 | 11 | 11 | 100.0000 | |
| jpowers-varprowl | INDEL | D6_15 | map_l150_m1_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 8 | 0 | 0 | 0 | |||
| jpowers-varprowl | INDEL | D6_15 | map_l150_m1_e0 | homalt | 86.9565 | 76.9231 | 100.0000 | 85.1852 | 20 | 6 | 20 | 0 | 0 | ||
| jpowers-varprowl | INDEL | D6_15 | map_l150_m2_e0 | * | 83.0189 | 80.4878 | 85.7143 | 91.6847 | 66 | 16 | 66 | 11 | 11 | 100.0000 | |
| jpowers-varprowl | INDEL | D6_15 | map_l150_m2_e0 | het | 87.1287 | 95.6522 | 80.0000 | 92.8664 | 44 | 2 | 44 | 11 | 11 | 100.0000 | |
| jpowers-varprowl | INDEL | D6_15 | map_l150_m2_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 8 | 0 | 0 | 0 | |||
| jpowers-varprowl | INDEL | D6_15 | map_l150_m2_e0 | homalt | 88.0000 | 78.5714 | 100.0000 | 85.8065 | 22 | 6 | 22 | 0 | 0 | ||
| jpowers-varprowl | INDEL | D6_15 | map_l150_m2_e1 | * | 80.9816 | 77.6471 | 84.6154 | 91.7373 | 66 | 19 | 66 | 12 | 12 | 100.0000 | |
| jpowers-varprowl | INDEL | D6_15 | map_l150_m2_e1 | het | 85.4369 | 93.6170 | 78.5714 | 92.8844 | 44 | 3 | 44 | 12 | 12 | 100.0000 | |
| jpowers-varprowl | INDEL | D6_15 | map_l150_m2_e1 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 9 | 0 | 0 | 0 | |||
| jpowers-varprowl | INDEL | D6_15 | map_l150_m2_e1 | homalt | 86.2745 | 75.8621 | 100.0000 | 85.9873 | 22 | 7 | 22 | 0 | 0 | ||
| jpowers-varprowl | INDEL | D6_15 | map_l250_m0_e0 | * | 100.0000 | 100.0000 | 100.0000 | 97.8417 | 6 | 0 | 6 | 0 | 0 | ||
| jpowers-varprowl | INDEL | D6_15 | map_l250_m0_e0 | het | 100.0000 | 100.0000 | 100.0000 | 98.2301 | 4 | 0 | 4 | 0 | 0 | ||
| jpowers-varprowl | INDEL | D6_15 | map_l250_m0_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| jpowers-varprowl | INDEL | D6_15 | map_l250_m0_e0 | homalt | 100.0000 | 100.0000 | 100.0000 | 96.1538 | 2 | 0 | 2 | 0 | 0 | ||
| jpowers-varprowl | INDEL | D6_15 | map_l250_m1_e0 | * | 88.2353 | 83.3333 | 93.7500 | 96.6736 | 15 | 3 | 15 | 1 | 1 | 100.0000 | |
| jpowers-varprowl | INDEL | D6_15 | map_l250_m1_e0 | het | 90.9091 | 90.9091 | 90.9091 | 97.2569 | 10 | 1 | 10 | 1 | 1 | 100.0000 | |
| jpowers-varprowl | INDEL | D6_15 | map_l250_m1_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 2 | 0 | 0 | 0 | |||
| jpowers-varprowl | INDEL | D6_15 | map_l250_m1_e0 | homalt | 100.0000 | 100.0000 | 100.0000 | 93.7500 | 5 | 0 | 5 | 0 | 0 | ||
| jpowers-varprowl | INDEL | D6_15 | map_l250_m2_e0 | * | 90.4762 | 86.3636 | 95.0000 | 96.3636 | 19 | 3 | 19 | 1 | 1 | 100.0000 | |
| jpowers-varprowl | INDEL | D6_15 | map_l250_m2_e0 | het | 92.8571 | 92.8571 | 92.8571 | 96.9697 | 13 | 1 | 13 | 1 | 1 | 100.0000 | |
| jpowers-varprowl | INDEL | D6_15 | map_l250_m2_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 2 | 0 | 0 | 0 | |||
| jpowers-varprowl | INDEL | D6_15 | map_l250_m2_e0 | homalt | 100.0000 | 100.0000 | 100.0000 | 93.1818 | 6 | 0 | 6 | 0 | 0 | ||
| jpowers-varprowl | INDEL | D6_15 | map_l250_m2_e1 | * | 90.4762 | 86.3636 | 95.0000 | 96.4349 | 19 | 3 | 19 | 1 | 1 | 100.0000 | |
| jpowers-varprowl | INDEL | D6_15 | map_l250_m2_e1 | het | 92.8571 | 92.8571 | 92.8571 | 97.0276 | 13 | 1 | 13 | 1 | 1 | 100.0000 | |
| jpowers-varprowl | INDEL | D6_15 | map_l250_m2_e1 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 2 | 0 | 0 | 0 | |||
| jpowers-varprowl | INDEL | D6_15 | map_l250_m2_e1 | homalt | 100.0000 | 100.0000 | 100.0000 | 93.3333 | 6 | 0 | 6 | 0 | 0 | ||
| jpowers-varprowl | INDEL | D6_15 | map_siren | * | 73.9453 | 70.3340 | 77.9476 | 83.7819 | 358 | 151 | 357 | 101 | 93 | 92.0792 | |
| jpowers-varprowl | INDEL | D6_15 | map_siren | het | 81.0642 | 92.5000 | 72.1448 | 84.9096 | 259 | 21 | 259 | 100 | 93 | 93.0000 | |
| jpowers-varprowl | INDEL | D6_15 | map_siren | hetalt | 0.0000 | 1.0101 | 0.0000 | 0.0000 | 1 | 98 | 0 | 0 | 0 | ||
| jpowers-varprowl | INDEL | D6_15 | map_siren | homalt | 85.5895 | 75.3846 | 98.9899 | 77.7528 | 98 | 32 | 98 | 1 | 0 | 0.0000 | |
| jpowers-varprowl | INDEL | D6_15 | segdup | * | 67.5255 | 63.3508 | 72.2892 | 93.4978 | 121 | 70 | 120 | 46 | 46 | 100.0000 | |
| jpowers-varprowl | INDEL | D6_15 | segdup | het | 74.3119 | 88.0435 | 64.2857 | 94.1066 | 81 | 11 | 81 | 45 | 45 | 100.0000 | |
| jpowers-varprowl | INDEL | D6_15 | segdup | hetalt | 0.0000 | 2.0408 | 0.0000 | 0.0000 | 1 | 48 | 0 | 0 | 0 | ||
| jpowers-varprowl | INDEL | D6_15 | segdup | homalt | 86.6667 | 78.0000 | 97.5000 | 90.3614 | 39 | 11 | 39 | 1 | 1 | 100.0000 | |
| jpowers-varprowl | INDEL | D6_15 | segdupwithalt | * | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| jpowers-varprowl | INDEL | D6_15 | segdupwithalt | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| jpowers-varprowl | INDEL | D6_15 | segdupwithalt | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| jpowers-varprowl | INDEL | D6_15 | segdupwithalt | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| jpowers-varprowl | INDEL | D6_15 | tech_badpromoters | * | 83.8710 | 76.4706 | 92.8571 | 56.2500 | 13 | 4 | 13 | 1 | 1 | 100.0000 | |
| jpowers-varprowl | INDEL | D6_15 | tech_badpromoters | het | 84.2105 | 80.0000 | 88.8889 | 59.0909 | 8 | 2 | 8 | 1 | 1 | 100.0000 | |
| jpowers-varprowl | INDEL | D6_15 | tech_badpromoters | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 1 | 0 | 0 | 0 | |||
| jpowers-varprowl | INDEL | D6_15 | tech_badpromoters | homalt | 90.9091 | 83.3333 | 100.0000 | 50.0000 | 5 | 1 | 5 | 0 | 0 | ||
| jpowers-varprowl | INDEL | I16_PLUS | * | * | 56.3839 | 48.9258 | 66.5246 | 59.4066 | 3120 | 3257 | 3122 | 1571 | 1564 | 99.5544 | |
| jpowers-varprowl | INDEL | I16_PLUS | * | het | 66.0542 | 76.3061 | 58.2307 | 60.8634 | 2074 | 644 | 2080 | 1492 | 1486 | 99.5979 | |
| jpowers-varprowl | INDEL | I16_PLUS | * | hetalt | 0.0000 | 0.3337 | 0.0000 | 0.0000 | 7 | 2091 | 0 | 0 | 0 | ||
| jpowers-varprowl | INDEL | I16_PLUS | * | homalt | 77.5728 | 66.5599 | 92.9527 | 53.9441 | 1039 | 522 | 1042 | 79 | 78 | 98.7342 | |