PrecisionFDA
Truth Challenge
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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
| Entry | Type | Subtype | Subset | Genotype | F-score | Recall | Precision | Frac_NA | Truth TP | Truth FN | Query TP | Query FP | FP gt | % FP ma | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
66951-67000 / 86044 show all | |||||||||||||||
| jpowers-varprowl | INDEL | D6_15 | lowcmp_SimpleRepeat_quadTR_51to200 | * | 19.1784 | 16.0456 | 23.8312 | 52.5433 | 211 | 1104 | 209 | 668 | 663 | 99.2515 | |
| jpowers-varprowl | INDEL | D6_15 | lowcmp_SimpleRepeat_quadTR_51to200 | het | 33.1178 | 59.0909 | 23.0058 | 50.3159 | 195 | 135 | 199 | 666 | 661 | 99.2492 | |
| jpowers-varprowl | INDEL | D6_15 | lowcmp_SimpleRepeat_quadTR_51to200 | hetalt | 0.0000 | 0.7566 | 0.0000 | 0.0000 | 6 | 787 | 0 | 0 | 0 | ||
| jpowers-varprowl | INDEL | D6_15 | lowcmp_SimpleRepeat_quadTR_51to200 | homalt | 9.8039 | 5.2083 | 83.3333 | 88.7850 | 10 | 182 | 10 | 2 | 2 | 100.0000 | |
| jpowers-varprowl | INDEL | D6_15 | lowcmp_SimpleRepeat_quadTR_gt200 | * | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| jpowers-varprowl | INDEL | D6_15 | lowcmp_SimpleRepeat_quadTR_gt200 | het | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| jpowers-varprowl | INDEL | D6_15 | lowcmp_SimpleRepeat_quadTR_gt200 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| jpowers-varprowl | INDEL | D6_15 | lowcmp_SimpleRepeat_quadTR_gt200 | homalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| jpowers-varprowl | INDEL | D6_15 | lowcmp_SimpleRepeat_triTR_11to50 | * | 50.2630 | 46.4740 | 54.7247 | 37.4043 | 804 | 926 | 805 | 666 | 663 | 99.5495 | |
| jpowers-varprowl | INDEL | D6_15 | lowcmp_SimpleRepeat_triTR_11to50 | het | 63.8782 | 90.0427 | 49.4957 | 35.6465 | 633 | 70 | 638 | 651 | 650 | 99.8464 | |
| jpowers-varprowl | INDEL | D6_15 | lowcmp_SimpleRepeat_triTR_11to50 | hetalt | 0.0000 | 0.6849 | 0.0000 | 0.0000 | 4 | 580 | 0 | 0 | 0 | ||
| jpowers-varprowl | INDEL | D6_15 | lowcmp_SimpleRepeat_triTR_11to50 | homalt | 53.4400 | 37.6975 | 91.7582 | 47.5504 | 167 | 276 | 167 | 15 | 13 | 86.6667 | |
| jpowers-varprowl | INDEL | D6_15 | lowcmp_SimpleRepeat_triTR_51to200 | * | 9.3220 | 7.7465 | 11.7021 | 43.7126 | 11 | 131 | 11 | 83 | 83 | 100.0000 | |
| jpowers-varprowl | INDEL | D6_15 | lowcmp_SimpleRepeat_triTR_51to200 | het | 17.0940 | 41.6667 | 10.7527 | 42.2360 | 10 | 14 | 10 | 83 | 83 | 100.0000 | |
| jpowers-varprowl | INDEL | D6_15 | lowcmp_SimpleRepeat_triTR_51to200 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 97 | 0 | 0 | 0 | |||
| jpowers-varprowl | INDEL | D6_15 | lowcmp_SimpleRepeat_triTR_51to200 | homalt | 9.0909 | 4.7619 | 100.0000 | 83.3333 | 1 | 20 | 1 | 0 | 0 | ||
| jpowers-varprowl | INDEL | D6_15 | map_l100_m0_e0 | * | 72.3618 | 69.9029 | 75.0000 | 88.7588 | 72 | 31 | 72 | 24 | 21 | 87.5000 | |
| jpowers-varprowl | INDEL | D6_15 | map_l100_m0_e0 | het | 79.1367 | 91.6667 | 69.6203 | 89.0733 | 55 | 5 | 55 | 24 | 21 | 87.5000 | |
| jpowers-varprowl | INDEL | D6_15 | map_l100_m0_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 19 | 0 | 0 | 0 | |||
| jpowers-varprowl | INDEL | D6_15 | map_l100_m0_e0 | homalt | 82.9268 | 70.8333 | 100.0000 | 87.0229 | 17 | 7 | 17 | 0 | 0 | ||
| jpowers-varprowl | INDEL | D6_15 | map_l100_m1_e0 | * | 66.4730 | 62.7907 | 70.6140 | 85.6874 | 162 | 96 | 161 | 67 | 64 | 95.5224 | |
| jpowers-varprowl | INDEL | D6_15 | map_l100_m1_e0 | het | 74.6753 | 91.2698 | 63.1868 | 86.5683 | 115 | 11 | 115 | 67 | 64 | 95.5224 | |
| jpowers-varprowl | INDEL | D6_15 | map_l100_m1_e0 | hetalt | 0.0000 | 1.4706 | 0.0000 | 0.0000 | 1 | 67 | 0 | 0 | 0 | ||
| jpowers-varprowl | INDEL | D6_15 | map_l100_m1_e0 | homalt | 83.6364 | 71.8750 | 100.0000 | 80.6723 | 46 | 18 | 46 | 0 | 0 | ||
| jpowers-varprowl | INDEL | D6_15 | map_l100_m2_e0 | * | 66.7463 | 62.8788 | 71.1207 | 86.3369 | 166 | 98 | 165 | 67 | 64 | 95.5224 | |
| jpowers-varprowl | INDEL | D6_15 | map_l100_m2_e0 | het | 74.6835 | 90.0763 | 63.7838 | 87.1438 | 118 | 13 | 118 | 67 | 64 | 95.5224 | |
| jpowers-varprowl | INDEL | D6_15 | map_l100_m2_e0 | hetalt | 0.0000 | 1.4706 | 0.0000 | 0.0000 | 1 | 67 | 0 | 0 | 0 | ||
| jpowers-varprowl | INDEL | D6_15 | map_l100_m2_e0 | homalt | 83.9286 | 72.3077 | 100.0000 | 81.8533 | 47 | 18 | 47 | 0 | 0 | ||
| jpowers-varprowl | INDEL | D6_15 | map_l100_m2_e1 | * | 65.1881 | 61.0909 | 69.8745 | 86.3116 | 168 | 107 | 167 | 72 | 69 | 95.8333 | |
| jpowers-varprowl | INDEL | D6_15 | map_l100_m2_e1 | het | 73.3945 | 88.8889 | 62.5000 | 87.0095 | 120 | 15 | 120 | 72 | 69 | 95.8333 | |
| jpowers-varprowl | INDEL | D6_15 | map_l100_m2_e1 | hetalt | 0.0000 | 1.3699 | 0.0000 | 0.0000 | 1 | 72 | 0 | 0 | 0 | ||
| jpowers-varprowl | INDEL | D6_15 | map_l100_m2_e1 | homalt | 82.4561 | 70.1493 | 100.0000 | 82.4627 | 47 | 20 | 47 | 0 | 0 | ||
| jpowers-varprowl | INDEL | D6_15 | map_l125_m0_e0 | * | 77.7778 | 74.4681 | 81.3953 | 92.8453 | 35 | 12 | 35 | 8 | 8 | 100.0000 | |
| jpowers-varprowl | INDEL | D6_15 | map_l125_m0_e0 | het | 82.5397 | 89.6552 | 76.4706 | 93.3071 | 26 | 3 | 26 | 8 | 8 | 100.0000 | |
| jpowers-varprowl | INDEL | D6_15 | map_l125_m0_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 6 | 0 | 0 | 0 | |||
| jpowers-varprowl | INDEL | D6_15 | map_l125_m0_e0 | homalt | 85.7143 | 75.0000 | 100.0000 | 90.3226 | 9 | 3 | 9 | 0 | 0 | ||
| jpowers-varprowl | INDEL | D6_15 | map_l125_m1_e0 | * | 77.6786 | 74.3590 | 81.3084 | 89.7706 | 87 | 30 | 87 | 20 | 19 | 95.0000 | |
| jpowers-varprowl | INDEL | D6_15 | map_l125_m1_e0 | het | 83.3333 | 93.7500 | 75.0000 | 90.8780 | 60 | 4 | 60 | 20 | 19 | 95.0000 | |
| jpowers-varprowl | INDEL | D6_15 | map_l125_m1_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 19 | 0 | 0 | 0 | |||
| jpowers-varprowl | INDEL | D6_15 | map_l125_m1_e0 | homalt | 88.5246 | 79.4118 | 100.0000 | 84.0237 | 27 | 7 | 27 | 0 | 0 | ||
| jpowers-varprowl | INDEL | D6_15 | map_l125_m2_e0 | * | 78.3333 | 74.6032 | 82.4561 | 90.1299 | 94 | 32 | 94 | 20 | 19 | 95.0000 | |
| jpowers-varprowl | INDEL | D6_15 | map_l125_m2_e0 | het | 83.3333 | 91.5493 | 76.4706 | 91.2099 | 65 | 6 | 65 | 20 | 19 | 95.0000 | |
| jpowers-varprowl | INDEL | D6_15 | map_l125_m2_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 19 | 0 | 0 | 0 | |||
| jpowers-varprowl | INDEL | D6_15 | map_l125_m2_e0 | homalt | 89.2308 | 80.5556 | 100.0000 | 84.5745 | 29 | 7 | 29 | 0 | 0 | ||
| jpowers-varprowl | INDEL | D6_15 | map_l125_m2_e1 | * | 77.3663 | 73.4375 | 81.7391 | 90.2294 | 94 | 34 | 94 | 21 | 20 | 95.2381 | |
| jpowers-varprowl | INDEL | D6_15 | map_l125_m2_e1 | het | 82.8025 | 91.5493 | 75.5814 | 91.2779 | 65 | 6 | 65 | 21 | 20 | 95.2381 | |
| jpowers-varprowl | INDEL | D6_15 | map_l125_m2_e1 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 20 | 0 | 0 | 0 | |||
| jpowers-varprowl | INDEL | D6_15 | map_l125_m2_e1 | homalt | 87.8788 | 78.3784 | 100.0000 | 84.8168 | 29 | 8 | 29 | 0 | 0 | ||
| jpowers-varprowl | INDEL | D6_15 | map_l150_m0_e0 | * | 79.3651 | 78.1250 | 80.6452 | 93.7120 | 25 | 7 | 25 | 6 | 6 | 100.0000 | |
| jpowers-varprowl | INDEL | D6_15 | map_l150_m0_e0 | het | 84.4444 | 95.0000 | 76.0000 | 93.9904 | 19 | 1 | 19 | 6 | 6 | 100.0000 | |