PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1330 1331 1332 1333 1334 1335 1336 1337 1338 ... 1720 1721 » 66651-66700 / 86044 show all
jpowers-varprowl	INDEL	C6_15	map_l250_m2_e0	*		0.0000	0.0000	0.0000	0	0	0	0	0
jpowers-varprowl	INDEL	C6_15	map_l250_m2_e0	het		0.0000	0.0000	0.0000	0	0	0	0	0
jpowers-varprowl	INDEL	C6_15	map_l250_m2_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
jpowers-varprowl	INDEL	C6_15	map_l250_m2_e0	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
jpowers-varprowl	INDEL	C6_15	map_l250_m2_e1	*		0.0000	0.0000	0.0000	0	0	0	0	0
jpowers-varprowl	INDEL	C6_15	map_l250_m2_e1	het		0.0000	0.0000	0.0000	0	0	0	0	0
jpowers-varprowl	INDEL	C6_15	map_l250_m2_e1	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
jpowers-varprowl	INDEL	C6_15	map_l250_m2_e1	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
jpowers-varprowl	INDEL	C6_15	map_siren	*		0.0000	0.0000	0.0000	0	0	0	0	0
jpowers-varprowl	INDEL	C6_15	map_siren	het		0.0000	0.0000	0.0000	0	0	0	0	0
jpowers-varprowl	INDEL	C6_15	map_siren	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
jpowers-varprowl	INDEL	C6_15	map_siren	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
jpowers-varprowl	INDEL	C6_15	segdup	*		0.0000	0.0000	0.0000	0	0	0	0	0
jpowers-varprowl	INDEL	C6_15	segdup	het		0.0000	0.0000	0.0000	0	0	0	0	0
jpowers-varprowl	INDEL	C6_15	segdup	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
jpowers-varprowl	INDEL	C6_15	segdup	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
jpowers-varprowl	INDEL	C6_15	segdupwithalt	*		0.0000	0.0000	0.0000	0	0	0	0	0
jpowers-varprowl	INDEL	C6_15	segdupwithalt	het		0.0000	0.0000	0.0000	0	0	0	0	0
jpowers-varprowl	INDEL	C6_15	segdupwithalt	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
jpowers-varprowl	INDEL	C6_15	segdupwithalt	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
jpowers-varprowl	INDEL	C6_15	tech_badpromoters	*		0.0000	0.0000	0.0000	0	0	0	0	0
jpowers-varprowl	INDEL	C6_15	tech_badpromoters	het		0.0000	0.0000	0.0000	0	0	0	0	0
jpowers-varprowl	INDEL	C6_15	tech_badpromoters	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
jpowers-varprowl	INDEL	C6_15	tech_badpromoters	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
jpowers-varprowl	INDEL	D16_PLUS	*	*	60.4248	56.9575	64.3415	68.1361	3864	2920	3874	2147	2111	98.3232
jpowers-varprowl	INDEL	D16_PLUS	*	het	70.8402	90.6933	58.1179	67.6572	2865	294	2878	2074	2042	98.4571
jpowers-varprowl	INDEL	D16_PLUS	*	hetalt	0.0000	0.2587	0.0000	0.0000	5	1928	0	0	0
jpowers-varprowl	INDEL	*	map_l100_m2_e0	hetalt	0.0000	0.8000	0.0000	0.0000	1	124	0	0	0
jpowers-varprowl	INDEL	*	map_l100_m2_e0	homalt	95.3164	91.9905	98.8917	79.6672	1160	101	1160	13	8	61.5385
jpowers-varprowl	INDEL	*	map_l100_m2_e1	*	91.1487	89.5367	92.8197	85.5685	3363	393	3361	260	208	80.0000
jpowers-varprowl	INDEL	*	map_l100_m2_e1	het	91.5148	93.2138	89.8765	87.3477	2184	159	2184	246	199	80.8943
jpowers-varprowl	INDEL	*	map_l100_m2_e1	hetalt	0.0000	1.5152	0.0000	0.0000	2	130	0	0	0
jpowers-varprowl	INDEL	*	map_l100_m2_e1	homalt	95.2265	91.8813	98.8245	79.7621	1177	104	1177	14	9	64.2857
jpowers-varprowl	INDEL	*	map_l125_m0_e0	*	93.0500	91.8367	94.2957	90.4640	810	72	810	49	30	61.2245
jpowers-varprowl	INDEL	*	map_l125_m0_e0	het	92.6995	93.0153	92.3858	91.5475	546	41	546	45	27	60.0000
jpowers-varprowl	INDEL	*	map_l125_m0_e0	hetalt		0.0000	0.0000	0.0000	0	11	0	0	0
jpowers-varprowl	INDEL	*	map_l125_m0_e0	homalt	95.6522	92.9577	98.5075	86.7063	264	20	264	4	3	75.0000
jpowers-varprowl	INDEL	*	map_l125_m1_e0	*	93.0277	91.5045	94.6026	87.5701	1928	179	1928	110	77	70.0000
jpowers-varprowl	INDEL	*	map_l125_m1_e0	het	92.8465	93.3333	92.3647	89.2132	1246	89	1246	103	73	70.8738
jpowers-varprowl	INDEL	*	map_l125_m1_e0	hetalt		0.0000	0.0000	0.0000	0	40	0	0	0
jpowers-varprowl	INDEL	*	map_l125_m1_e0	homalt	95.9887	93.1694	98.9840	82.2879	682	50	682	7	4	57.1429
jpowers-varprowl	INDEL	*	map_l125_m2_e0	*	93.0771	91.5301	94.6773	88.3364	2010	186	2010	113	79	69.9115
jpowers-varprowl	INDEL	*	map_l125_m2_e0	het	92.9134	93.3142	92.5160	89.8956	1298	93	1298	105	74	70.4762
jpowers-varprowl	INDEL	*	map_l125_m2_e0	hetalt		0.0000	0.0000	0.0000	0	42	0	0	0
jpowers-varprowl	INDEL	*	map_l125_m2_e0	homalt	96.0216	93.3159	98.8889	83.3218	712	51	712	8	5	62.5000
jpowers-varprowl	INDEL	*	map_l125_m2_e1	*	92.9861	91.4607	94.5632	88.4195	2035	190	2035	117	81	69.2308
jpowers-varprowl	INDEL	*	map_l125_m2_e1	het	92.8294	93.3239	92.3401	89.9662	1314	94	1314	109	76	69.7248
jpowers-varprowl	INDEL	*	map_l125_m2_e1	hetalt		0.0000	0.0000	0.0000	0	43	0	0	0
jpowers-varprowl	INDEL	*	map_l125_m2_e1	homalt	95.9415	93.1525	98.9026	83.4356	721	53	721	8	5	62.5000
jpowers-varprowl	INDEL	*	map_l150_m0_e0	*	92.9134	91.8288	94.0239	93.2052	472	42	472	30	20	66.6667

PrecisionFDA Truth Challenge

PrecisionFDA
Truth Challenge