PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1225 1226 1227 1228 1229 1230 1231 1232 1233 ... 1720 1721 » 61401-61450 / 86044 show all
jli-custom	SNP	ti	map_l100_m0_e0	hetalt	96.5517	100.0000	93.3333	66.6667	14	0	14	1	1	100.0000
jli-custom	SNP	ti	map_l100_m0_e0	homalt	99.6776	99.4340	99.9224	57.9039	7730	44	7730	6	6	100.0000
jli-custom	SNP	ti	map_l100_m1_e0	*	99.4974	99.3240	99.6713	60.4603	47607	324	47605	157	50	31.8471
jli-custom	SNP	ti	map_l100_m1_e0	het	99.3190	99.1250	99.5138	62.5391	29680	262	29678	145	38	26.2069
jli-custom	SNP	ti	map_l100_m1_e0	hetalt	98.3051	100.0000	96.6667	70.5882	29	0	29	1	1	100.0000
jli-custom	SNP	ti	map_l100_m1_e0	homalt	99.7965	99.6548	99.9386	56.4067	17898	62	17898	11	11	100.0000
jli-custom	SNP	ti	map_l100_m2_e0	*	99.4978	99.3362	99.6598	62.5143	48636	325	48634	166	50	30.1205
jli-custom	SNP	ti	map_l100_m2_e0	het	99.3179	99.1411	99.4953	64.3096	30359	263	30357	154	38	24.6753
jli-custom	SNP	ti	map_l100_m2_e0	hetalt	98.3607	100.0000	96.7742	72.8070	30	0	30	1	1	100.0000
jli-custom	SNP	ti	map_l100_m2_e0	homalt	99.8004	99.6614	99.9398	59.0453	18247	62	18247	11	11	100.0000
jli-custom	SNP	ti	map_l100_m2_e1	*	99.5011	99.3412	99.6614	62.5257	49159	326	49157	167	50	29.9401
jli-custom	SNP	ti	map_l100_m2_e1	het	99.3237	99.1505	99.4976	64.3340	30697	263	30695	155	38	24.5161
jli-custom	SNP	ti	map_l100_m2_e1	hetalt	98.4127	100.0000	96.8750	72.1739	31	0	31	1	1	100.0000
jli-custom	SNP	ti	map_l100_m2_e1	homalt	99.7997	99.6593	99.9404	59.0260	18431	63	18431	11	11	100.0000
jli-custom	SNP	ti	map_l125_m0_e0	*	98.9692	98.5504	99.3915	69.4510	12577	185	12577	77	30	38.9610
jli-custom	SNP	ti	map_l125_m0_e0	het	98.6256	98.1363	99.1199	71.4709	8109	154	8109	72	25	34.7222
jli-custom	SNP	ti	map_l125_m0_e0	hetalt	100.0000	100.0000	100.0000	73.3333	8	0	8	0	0
jli-custom	SNP	ti	map_l125_m0_e0	homalt	99.5980	99.3097	99.8880	64.8868	4460	31	4460	5	5	100.0000
jli-custom	SNP	ti	map_l125_m1_e0	*	99.3574	99.1001	99.6162	66.6526	29071	264	29069	112	41	36.6071
jli-custom	SNP	ti	map_l125_m1_e0	het	99.1158	98.8065	99.4270	68.8246	18048	218	18046	104	33	31.7308
jli-custom	SNP	ti	map_l125_m1_e0	hetalt	100.0000	100.0000	100.0000	67.5676	24	0	24	0	0
jli-custom	SNP	ti	map_l125_m1_e0	homalt	99.7551	99.5835	99.9273	62.3216	10999	46	10999	8	8	100.0000
jli-custom	SNP	ti	map_l125_m2_e0	*	99.3639	99.1176	99.6114	68.7298	29991	267	29989	117	41	35.0427
jli-custom	SNP	ti	map_l125_m2_e0	het	99.1286	98.8398	99.4191	70.5575	18657	219	18655	109	33	30.2752
jli-custom	SNP	ti	map_l125_m2_e0	hetalt	100.0000	100.0000	100.0000	73.6264	24	0	24	0	0
jli-custom	SNP	ti	map_l125_m2_e0	homalt	99.7530	99.5774	99.9293	65.1271	11310	48	11310	8	8	100.0000
jli-custom	SNP	ti	map_l125_m2_e1	*	99.3704	99.1266	99.6153	68.7864	30302	267	30300	117	41	35.0427
jli-custom	SNP	ti	map_l125_m2_e1	het	99.1383	98.8526	99.4256	70.6228	18868	219	18866	109	33	30.2752
jli-custom	SNP	ti	map_l125_m2_e1	hetalt	100.0000	100.0000	100.0000	73.6264	24	0	24	0	0
jli-custom	SNP	ti	map_l125_m2_e1	homalt	99.7552	99.5811	99.9299	65.1529	11410	48	11410	8	8	100.0000
jli-custom	SNP	ti	map_l150_m0_e0	*	98.8029	98.1682	99.4459	75.0426	7717	144	7717	43	19	44.1860
jli-custom	SNP	ti	map_l150_m0_e0	het	98.3675	97.5280	99.2216	76.7991	4971	126	4971	39	15	38.4615
jli-custom	SNP	ti	map_l150_m0_e0	hetalt	100.0000	100.0000	100.0000	86.3636	3	0	3	0	0
jli-custom	SNP	ti	map_l150_m0_e0	homalt	99.6006	99.3481	99.8544	71.0140	2743	18	2743	4	4	100.0000
jli-custom	SNP	ti	map_l150_m1_e0	*	99.2008	98.8636	99.5403	71.1664	19488	224	19486	90	35	38.8889
jli-custom	SNP	ti	map_l150_m1_e0	het	98.8959	98.4802	99.3151	73.0550	12182	188	12180	84	29	34.5238
jli-custom	SNP	ti	map_l150_m1_e0	hetalt	100.0000	100.0000	100.0000	73.6842	15	0	15	0	0
jli-custom	SNP	ti	map_l150_m1_e0	homalt	99.7128	99.5087	99.9178	67.3088	7291	36	7291	6	6	100.0000
jli-custom	SNP	ti	map_l150_m2_e0	*	99.2101	98.8933	99.5289	73.1343	20285	227	20283	96	36	37.5000
jli-custom	SNP	ti	map_l150_m2_e0	het	98.9128	98.5327	99.2958	74.7496	12692	189	12690	90	30	33.3333
jli-custom	SNP	ti	map_l150_m2_e0	hetalt	100.0000	100.0000	100.0000	77.9412	15	0	15	0	0
jli-custom	SNP	ti	map_l150_m2_e0	homalt	99.7105	99.5011	99.9209	69.8737	7578	38	7578	6	6	100.0000
jli-custom	SNP	ti	map_l150_m2_e1	*	99.2158	98.9046	99.5289	73.2251	20496	227	20494	97	36	37.1134
jli-custom	SNP	ti	map_l150_m2_e1	het	98.9202	98.5478	99.2954	74.8618	12826	189	12824	91	30	32.9670
jli-custom	SNP	ti	map_l150_m2_e1	hetalt	100.0000	100.0000	100.0000	77.9412	15	0	15	0	0
jli-custom	SNP	ti	map_l150_m2_e1	homalt	99.7134	99.5060	99.9217	69.9097	7655	38	7655	6	6	100.0000
jli-custom	SNP	ti	map_l250_m0_e0	*	97.5483	95.8394	99.3192	90.4686	1313	57	1313	9	7	77.7778
jli-custom	SNP	ti	map_l250_m0_e0	het	96.7636	94.4325	99.2126	90.7809	882	52	882	7	5	71.4286
jli-custom	SNP	ti	map_l250_m0_e0	hetalt		0.0000		100.0000	0	0	0	0	0
jli-custom	SNP	ti	map_l250_m0_e0	homalt	99.1945	98.8532	99.5381	89.7296	431	5	431	2	2	100.0000

PrecisionFDA Truth Challenge

PrecisionFDA
Truth Challenge