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Explore HG002 comparison results
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Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
57451-57500 / 86044 show all
hfeng-pmm3INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhomalt
98.8636
99.2867
98.4441
47.1402
27842027844443
97.7273
hfeng-pmm3INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged*
97.9752
96.7154
99.2683
46.8913
10718364107187974
93.6709
hfeng-pmm3INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhet
96.8124
95.6628
97.9899
63.3939
313214231206461
95.3125
hfeng-pmm3INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
97.9550
96.0096
99.9809
26.3336
5221217523310
0.0000
hfeng-pmm3INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhomalt
99.5999
99.7890
99.4115
47.4486
2365523651413
92.8571
hfeng-pmm3INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged*
97.0660
95.3263
98.8704
48.8773
1409469114092161153
95.0311
hfeng-pmm3INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhet
96.3028
95.2767
97.3513
64.8567
42362104190114109
95.6140
hfeng-pmm3INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
96.6740
93.5880
99.9704
27.5688
6714460675821
50.0000
hfeng-pmm3INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhomalt
98.9613
99.3365
98.5889
49.3810
31442131444543
95.5556
hfeng-pmm3INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged*
97.2064
95.5068
98.9676
53.3545
1687779416872176162
92.0455
hfeng-pmm3INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
96.5955
95.4157
97.8049
67.5959
55782685525124115
92.7419
hfeng-pmm3INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
96.7735
93.7833
99.9606
29.6505
7558501760632
66.6667
hfeng-pmm3INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
99.0206
99.3362
98.7071
54.3318
37412537414945
91.8367
hfeng-pmm3INDELD6_15lowcmp_SimpleRepeat_diTR_11to50*
97.5311
96.0668
99.0408
42.6732
908637290868881
92.0455
hfeng-pmm3INDELD6_15lowcmp_SimpleRepeat_diTR_11to50het
95.8650
94.2920
97.4914
60.1243
257715625656661
92.4242
hfeng-pmm3INDELD6_15lowcmp_SimpleRepeat_diTR_11to50hetalt
97.7726
95.6622
99.9782
25.5368
4565207457710
0.0000
hfeng-pmm3INDELD6_15lowcmp_SimpleRepeat_diTR_11to50homalt
99.2343
99.5392
98.9313
39.6684
1944919442120
95.2381
hfeng-pmm3INDELD6_15lowcmp_SimpleRepeat_diTR_51to200*
84.3708
77.0533
93.2238
41.8507
9102719086666
100.0000
hfeng-pmm3INDELD6_15lowcmp_SimpleRepeat_diTR_51to200het
75.1699
81.7568
69.5652
72.8346
12127964242
100.0000
hfeng-pmm3INDELD6_15lowcmp_SimpleRepeat_diTR_51to200hetalt
84.7544
73.6239
99.8498
26.3274
64223066511
100.0000
hfeng-pmm3INDELD6_15lowcmp_SimpleRepeat_diTR_51to200homalt
88.8218
91.3043
86.4706
35.3612
147141472323
100.0000
hfeng-pmm3INDELD6_15lowcmp_SimpleRepeat_diTR_gt200*
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELD6_15lowcmp_SimpleRepeat_diTR_gt200het
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELD6_15lowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELD6_15lowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELD6_15lowcmp_SimpleRepeat_homopolymer_6to10*
99.2424
98.4962
100.0000
80.9731
262426200
hfeng-pmm3INDELD6_15lowcmp_SimpleRepeat_homopolymer_6to10het
99.0228
98.0645
100.0000
82.9596
152315200
hfeng-pmm3INDELD6_15lowcmp_SimpleRepeat_homopolymer_6to10hetalt
98.6301
97.2973
100.0000
63.2653
3613600
hfeng-pmm3INDELD6_15lowcmp_SimpleRepeat_homopolymer_6to10homalt
100.0000
100.0000
100.0000
80.8786
7407400
hfeng-pmm3INDELD6_15lowcmp_SimpleRepeat_homopolymer_gt10*
84.9057
78.9474
91.8367
99.3649
45124540
0.0000
hfeng-pmm3INDELD6_15lowcmp_SimpleRepeat_homopolymer_gt10het
80.0000
71.4286
90.9091
99.2920
30123030
0.0000
hfeng-pmm3INDELD6_15lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.1045
90900
hfeng-pmm3INDELD6_15lowcmp_SimpleRepeat_homopolymer_gt10homalt
92.3077
100.0000
85.7143
99.6584
60610
0.0000
hfeng-pmm3INDELD6_15lowcmp_SimpleRepeat_quadTR_11to50*
98.9050
97.9929
99.8342
48.4986
361374361363
50.0000
hfeng-pmm3INDELD6_15lowcmp_SimpleRepeat_quadTR_11to50het
98.3153
96.9789
99.6891
57.4040
160550160352
40.0000
hfeng-pmm3INDELD6_15lowcmp_SimpleRepeat_quadTR_11to50hetalt
99.1468
98.3080
100.0000
27.7467
116220116400
hfeng-pmm3INDELD6_15lowcmp_SimpleRepeat_quadTR_11to50homalt
99.7054
99.5294
99.8819
48.3851
846484611
100.0000
hfeng-pmm3INDELD6_15lowcmp_SimpleRepeat_quadTR_51to200*
96.9007
95.1331
98.7352
48.1982
12516412491611
68.7500
hfeng-pmm3INDELD6_15lowcmp_SimpleRepeat_quadTR_51to200het
95.0246
94.2424
95.8199
71.5462
31119298139
69.2308
hfeng-pmm3INDELD6_15lowcmp_SimpleRepeat_quadTR_51to200hetalt
97.0178
94.3253
99.8684
24.7525
7484575911
100.0000
hfeng-pmm3INDELD6_15lowcmp_SimpleRepeat_quadTR_51to200homalt
99.4819
100.0000
98.9691
42.7729
192019221
50.0000
hfeng-pmm3INDELD6_15lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELD6_15lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELD6_15lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELD6_15lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELD6_15lowcmp_SimpleRepeat_triTR_11to50*
99.3028
98.7861
99.8249
33.3463
170921171032
66.6667
hfeng-pmm3INDELD6_15lowcmp_SimpleRepeat_triTR_11to50het
98.7814
98.0085
99.5665
42.6678
6891468932
66.6667
hfeng-pmm3INDELD6_15lowcmp_SimpleRepeat_triTR_11to50hetalt
99.4836
98.9726
100.0000
18.6798
578657900
hfeng-pmm3INDELD6_15lowcmp_SimpleRepeat_triTR_11to50homalt
99.8870
99.7743
100.0000
32.1045
442144200
hfeng-pmm3INDELD6_15lowcmp_SimpleRepeat_triTR_51to200*
97.8546
96.4789
99.2701
42.6778
137513611
100.0000