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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1133 1134 1135 1136 1137 1138 1139 1140 1141 ... 1720 1721 » 56801-56850 / 86044 show all
hfeng-pmm3	SNP	tv	segdup	*	99.7247	99.7890	99.6604	90.6553	8514	18	8510	29	5	17.2414
hfeng-pmm3	SNP	tv	segdup	het	99.6218	99.6974	99.5464	90.8847	5271	16	5267	24	0	0.0000
hfeng-pmm3	SNP	tv	segdup	hetalt	100.0000	100.0000	100.0000	97.5352	7	0	7	0	0
hfeng-pmm3	SNP	tv	segdup	homalt	99.8920	99.9382	99.8457	90.1933	3236	2	3236	5	5	100.0000
hfeng-pmm3	SNP	tv	segdupwithalt	*		0.0000		100.0000	0	0	0	0	0
hfeng-pmm3	SNP	tv	segdupwithalt	het		0.0000		100.0000	0	0	0	0	0
hfeng-pmm3	SNP	tv	segdupwithalt	hetalt		0.0000		100.0000	0	0	0	0	0
hfeng-pmm3	SNP	tv	segdupwithalt	homalt		0.0000		100.0000	0	0	0	0	0
hfeng-pmm3	SNP	tv	tech_badpromoters	*	99.3007	98.6111	100.0000	48.9209	71	1	71	0	0
hfeng-pmm3	SNP	tv	tech_badpromoters	het	98.4615	96.9697	100.0000	41.8182	32	1	32	0	0
hfeng-pmm3	SNP	tv	tech_badpromoters	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
hfeng-pmm3	SNP	tv	tech_badpromoters	homalt	100.0000	100.0000	100.0000	53.5714	39	0	39	0	0
hfeng-pmm3	SNP	*	map_l250_m0_e0	homalt	98.8124	99.2051	98.4227	92.6442	624	5	624	10	5	50.0000
hfeng-pmm3	SNP	*	map_l250_m1_e0	*	98.9535	98.8507	99.0565	88.1658	7139	83	7139	68	9	13.2353
hfeng-pmm3	SNP	*	map_l250_m1_e0	het	98.6931	98.4648	98.9225	88.7103	4682	73	4682	51	3	5.8824
hfeng-pmm3	SNP	*	map_l250_m1_e0	hetalt	100.0000	100.0000	100.0000	93.4426	4	0	4	0	0
hfeng-pmm3	SNP	*	map_l250_m1_e0	homalt	99.4527	99.5940	99.3117	86.9423	2453	10	2453	17	6	35.2941
hfeng-pmm3	SNP	*	map_l250_m2_e0	*	99.0163	98.9347	99.0981	88.6629	7801	84	7801	71	9	12.6761
hfeng-pmm3	SNP	*	map_l250_m2_e0	het	98.7752	98.5945	98.9565	89.0448	5121	73	5121	54	3	5.5556
hfeng-pmm3	SNP	*	map_l250_m2_e0	hetalt	100.0000	100.0000	100.0000	92.7536	5	0	5	0	0
hfeng-pmm3	SNP	*	map_l250_m2_e0	homalt	99.4794	99.5905	99.3685	87.8350	2675	11	2675	17	6	35.2941
hfeng-pmm3	SNP	*	map_l250_m2_e1	*	99.0226	98.9358	99.1095	88.7342	7902	85	7902	71	9	12.6761
hfeng-pmm3	SNP	*	map_l250_m2_e1	het	98.7819	98.5942	98.9703	89.1221	5190	74	5190	54	3	5.5556
hfeng-pmm3	SNP	*	map_l250_m2_e1	hetalt	100.0000	100.0000	100.0000	92.7536	5	0	5	0	0
hfeng-pmm3	SNP	*	map_l250_m2_e1	homalt	99.4855	99.5953	99.3759	87.8906	2707	11	2707	17	6	35.2941
hfeng-pmm3	SNP	*	map_siren	*	99.7673	99.6957	99.8390	54.1028	145783	445	145760	235	40	17.0213
hfeng-pmm3	SNP	*	map_siren	het	99.6837	99.5824	99.7852	54.5786	90611	380	90597	195	18	9.2308
hfeng-pmm3	SNP	*	map_siren	hetalt	99.3789	98.7654	100.0000	75.0779	80	1	80	0	0
hfeng-pmm3	SNP	*	map_siren	homalt	99.9057	99.8840	99.9274	53.2388	55092	64	55083	40	22	55.0000
hfeng-pmm3	SNP	*	segdup	*	99.7170	99.8183	99.6159	89.5042	28016	51	28010	108	8	7.4074
hfeng-pmm3	SNP	*	segdup	het	99.5790	99.7344	99.4241	89.8527	17271	46	17265	100	0	0.0000
hfeng-pmm3	SNP	*	segdup	hetalt	100.0000	100.0000	100.0000	97.5352	7	0	7	0	0
hfeng-pmm3	SNP	*	segdup	homalt	99.9395	99.9535	99.9256	88.8624	10738	5	10738	8	8	100.0000
hfeng-pmm3	SNP	*	segdupwithalt	*		0.0000		100.0000	0	0	0	0	0
hfeng-pmm3	SNP	*	segdupwithalt	het		0.0000		100.0000	0	0	0	0	0
hfeng-pmm3	SNP	*	segdupwithalt	hetalt		0.0000		100.0000	0	0	0	0	0
hfeng-pmm3	SNP	*	segdupwithalt	homalt		0.0000		100.0000	0	0	0	0	0
hfeng-pmm3	SNP	*	tech_badpromoters	*	99.3590	98.7261	100.0000	45.9930	155	2	155	0	0
hfeng-pmm3	SNP	*	tech_badpromoters	het	98.6842	97.4026	100.0000	43.1818	75	2	75	0	0
hfeng-pmm3	SNP	*	tech_badpromoters	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
hfeng-pmm3	SNP	*	tech_badpromoters	homalt	100.0000	100.0000	100.0000	48.3871	80	0	80	0	0
hfeng-pmm3	SNP	ti	*	*	99.9596	99.9417	99.9775	17.0194	2084295	1216	2084236	469	46	9.8081
hfeng-pmm3	SNP	ti	*	het	99.9388	99.9112	99.9664	17.2454	1280753	1138	1280703	430	18	4.1861
hfeng-pmm3	SNP	ti	*	hetalt	99.7420	99.6564	99.8279	45.8022	580	2	580	1	1	100.0000
hfeng-pmm3	SNP	ti	*	homalt	99.9929	99.9905	99.9953	16.6242	802962	76	802953	38	27	71.0526
hfeng-pmm3	SNP	ti	HG002complexvar	*	99.9019	99.8171	99.9868	17.4486	507506	930	507446	67	25	37.3134
hfeng-pmm3	SNP	ti	HG002complexvar	het	99.8511	99.7192	99.9834	16.8098	313882	884	313832	52	10	19.2308
hfeng-pmm3	SNP	ti	HG002complexvar	hetalt	99.5146	99.0338	100.0000	37.3089	205	2	205	0	0
hfeng-pmm3	SNP	ti	HG002complexvar	homalt	99.9848	99.9773	99.9922	18.4374	193419	44	193409	15	15	100.0000
hfeng-pmm3	SNP	ti	HG002compoundhet	*	98.2879	96.7330	99.8937	34.5867	16907	571	16909	18	8	44.4444

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