PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
53601-53650 / 86044 show all
hfeng-pmm2SNPtimap_l100_m2_e0het
99.3370
99.3436
99.3305
69.0739
304212013041420516
7.8049
hfeng-pmm2SNPtimap_l100_m2_e0hetalt
100.0000
100.0000
100.0000
75.8065
3003000
hfeng-pmm2SNPtimap_l100_m2_e0homalt
99.8744
99.8798
99.8689
62.5825
1828722182872414
58.3333
hfeng-pmm2SNPtimap_l100_m2_e1*
99.5423
99.5494
99.5352
66.9275
492622234925523030
13.0435
hfeng-pmm2SNPtimap_l100_m2_e1het
99.3427
99.3508
99.3346
69.0698
307592013075220616
7.7670
hfeng-pmm2SNPtimap_l100_m2_e1hetalt
100.0000
100.0000
100.0000
75.2000
3103100
hfeng-pmm2SNPtimap_l100_m2_e1homalt
99.8756
99.8810
99.8702
62.5670
1847222184722414
58.3333
hfeng-pmm2SNPtimap_l125_m0_e0*
99.1282
99.3496
98.9077
76.2142
12679831267714017
12.1429
hfeng-pmm2SNPtimap_l125_m0_e0het
98.8238
99.1529
98.4969
78.6095
819370819112511
8.8000
hfeng-pmm2SNPtimap_l125_m0_e0hetalt
100.0000
100.0000
100.0000
80.0000
80800
hfeng-pmm2SNPtimap_l125_m0_e0homalt
99.6883
99.7105
99.6661
69.9826
4478134478156
40.0000
hfeng-pmm2SNPtimap_l125_m1_e0*
99.4105
99.4648
99.3563
71.7136
291781572917418923
12.1693
hfeng-pmm2SNPtimap_l125_m1_e0het
99.1603
99.2500
99.0708
74.2780
181291371812517014
8.2353
hfeng-pmm2SNPtimap_l125_m1_e0hetalt
100.0000
100.0000
100.0000
71.4286
2402400
hfeng-pmm2SNPtimap_l125_m1_e0homalt
99.8234
99.8189
99.8280
66.1185
110252011025199
47.3684
hfeng-pmm2SNPtimap_l125_m2_e0*
99.4203
99.4745
99.3661
73.2412
300991593009519223
11.9792
hfeng-pmm2SNPtimap_l125_m2_e0het
99.1742
99.2636
99.0849
75.4183
187371391873317314
8.0925
hfeng-pmm2SNPtimap_l125_m2_e0hetalt
100.0000
100.0000
100.0000
76.0000
2402400
hfeng-pmm2SNPtimap_l125_m2_e0homalt
99.8283
99.8239
99.8327
68.6045
113382011338199
47.3684
hfeng-pmm2SNPtimap_l125_m2_e1*
99.4245
99.4799
99.3693
73.2743
304101593040619323
11.9171
hfeng-pmm2SNPtimap_l125_m2_e1het
99.1807
99.2718
99.0899
75.4485
189481391894417414
8.0460
hfeng-pmm2SNPtimap_l125_m2_e1hetalt
100.0000
100.0000
100.0000
76.0000
2402400
hfeng-pmm2SNPtimap_l125_m2_e1homalt
99.8298
99.8254
99.8342
68.6316
114382011438199
47.3684
hfeng-pmm2SNPtimap_l150_m0_e0*
98.9345
99.2367
98.6341
81.2825
780160779910813
12.0370
hfeng-pmm2SNPtimap_l150_m0_e0het
98.5736
98.9994
98.1514
83.2987
5046515044958
8.4211
hfeng-pmm2SNPtimap_l150_m0_e0hetalt
100.0000
100.0000
100.0000
90.3226
30300
hfeng-pmm2SNPtimap_l150_m0_e0homalt
99.6019
99.6740
99.5298
75.8368
275292752135
38.4615
hfeng-pmm2SNPtimap_l150_m1_e0*
99.2981
99.4065
99.1899
76.2408
195951171959116020
12.5000
hfeng-pmm2SNPtimap_l150_m1_e0het
99.0031
99.1673
98.8394
78.5331
122671031226314413
9.0278
hfeng-pmm2SNPtimap_l150_m1_e0hetalt
100.0000
100.0000
100.0000
76.5625
1501500
hfeng-pmm2SNPtimap_l150_m1_e0homalt
99.7953
99.8089
99.7817
70.9972
7313147313167
43.7500
hfeng-pmm2SNPtimap_l150_m2_e0*
99.3133
99.4247
99.2021
77.6100
203941182039016420
12.1951
hfeng-pmm2SNPtimap_l150_m2_e0het
99.0233
99.1926
98.8546
79.5912
127771041277314813
8.7838
hfeng-pmm2SNPtimap_l150_m2_e0hetalt
100.0000
100.0000
100.0000
79.7297
1501500
hfeng-pmm2SNPtimap_l150_m2_e0homalt
99.8031
99.8162
99.7900
73.1902
7602147602167
43.7500
hfeng-pmm2SNPtimap_l150_m2_e1*
99.3155
99.4306
99.2007
77.6747
206051182060116620
12.0482
hfeng-pmm2SNPtimap_l150_m2_e1het
99.0257
99.2009
98.8512
79.6610
129111041290715013
8.6667
hfeng-pmm2SNPtimap_l150_m2_e1hetalt
100.0000
100.0000
100.0000
79.7297
1501500
hfeng-pmm2SNPtimap_l150_m2_e1homalt
99.8050
99.8180
99.7921
73.2339
7679147679167
43.7500
hfeng-pmm2SNPtimap_l250_m0_e0*
98.1118
98.6131
97.6156
93.5472
1351191351335
15.1515
hfeng-pmm2SNPtimap_l250_m0_e0het
97.6596
98.2869
97.0402
94.0240
91816918283
10.7143
hfeng-pmm2SNPtimap_l250_m0_e0hetalt
0.0000
100.0000
00000
hfeng-pmm2SNPtimap_l250_m0_e0homalt
99.0847
99.3119
98.8584
92.1786
433343352
40.0000
hfeng-pmm2SNPtimap_l250_m1_e0*
98.7163
99.0828
98.3525
89.4985
4537424537769
11.8421
hfeng-pmm2SNPtimap_l250_m1_e0het
98.2909
98.8208
97.7667
90.5159
2933352933677
10.4478
hfeng-pmm2SNPtimap_l250_m1_e0hetalt
100.0000
100.0000
100.0000
88.8889
40400
hfeng-pmm2SNPtimap_l250_m1_e0homalt
99.5025
99.5644
99.4406
86.8749
16007160092
22.2222
hfeng-pmm2SNPtimap_l250_m2_e0*
98.8259
99.1613
98.4927
89.9448
4966424966769
11.8421
hfeng-pmm2SNPtimap_l250_m2_e0het
98.4404
98.9244
97.9610
90.8174
3219353219677
10.4478
hfeng-pmm2SNPtimap_l250_m2_e0hetalt
100.0000
100.0000
100.0000
87.5000
50500