PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1059 1060 1061 1062 1063 1064 1065 1066 1067 ... 1720 1721 » 53101-53150 / 86044 show all
hfeng-pmm1	SNP	ti	map_l100_m0_e0	*	99.4038	99.1778	99.6308	67.2084	21592	179	21589	80	22	27.5000
hfeng-pmm1	SNP	ti	map_l100_m0_e0	het	99.2035	98.8772	99.5320	69.1542	13826	157	13823	65	16	24.6154
hfeng-pmm1	SNP	ti	map_l100_m0_e0	hetalt	100.0000	100.0000	100.0000	74.5455	14	0	14	0	0
hfeng-pmm1	SNP	ti	map_l100_m0_e0	homalt	99.7619	99.7170	99.8069	63.0178	7752	22	7752	15	6	40.0000
hfeng-pmm1	SNP	ti	map_l100_m1_e0	*	99.5693	99.3532	99.7862	62.2569	47621	310	47614	102	32	31.3725
hfeng-pmm1	SNP	ti	map_l100_m1_e0	het	99.3951	99.0615	99.7309	63.4093	29661	281	29654	80	20	25.0000
hfeng-pmm1	SNP	ti	map_l100_m1_e0	hetalt	100.0000	100.0000	100.0000	73.6364	29	0	29	0	0
hfeng-pmm1	SNP	ti	map_l100_m1_e0	homalt	99.8580	99.8385	99.8775	60.1505	17931	29	17931	22	12	54.5455
hfeng-pmm1	SNP	ti	map_l100_m2_e0	*	99.5722	99.3566	99.7887	64.0145	48646	315	48639	103	32	31.0680
hfeng-pmm1	SNP	ti	map_l100_m2_e0	het	99.3987	99.0660	99.7336	64.8032	30336	286	30329	81	20	24.6914
hfeng-pmm1	SNP	ti	map_l100_m2_e0	hetalt	100.0000	100.0000	100.0000	75.6098	30	0	30	0	0
hfeng-pmm1	SNP	ti	map_l100_m2_e0	homalt	99.8607	99.8416	99.8798	62.5925	18280	29	18280	22	12	54.5455
hfeng-pmm1	SNP	ti	map_l100_m2_e1	*	99.5757	99.3634	99.7889	64.0077	49170	315	49163	104	32	30.7692
hfeng-pmm1	SNP	ti	map_l100_m2_e1	het	99.4037	99.0762	99.7333	64.8020	30674	286	30667	82	20	24.3902
hfeng-pmm1	SNP	ti	map_l100_m2_e1	hetalt	100.0000	100.0000	100.0000	75.0000	31	0	31	0	0
hfeng-pmm1	SNP	ti	map_l100_m2_e1	homalt	99.8621	99.8432	99.8810	62.5754	18465	29	18465	22	12	54.5455
hfeng-pmm1	SNP	ti	map_l125_m0_e0	*	99.2424	99.0519	99.4336	73.9101	12641	121	12639	72	20	27.7778
hfeng-pmm1	SNP	ti	map_l125_m0_e0	het	99.0169	98.7414	99.2940	75.6362	8159	104	8157	58	15	25.8621
hfeng-pmm1	SNP	ti	map_l125_m0_e0	hetalt	100.0000	100.0000	100.0000	80.0000	8	0	8	0	0
hfeng-pmm1	SNP	ti	map_l125_m0_e0	homalt	99.6547	99.6215	99.6881	70.0040	4474	17	4474	14	5	35.7143
hfeng-pmm1	SNP	ti	map_l125_m1_e0	*	99.4515	99.2091	99.6951	68.8149	29103	232	29099	89	25	28.0899
hfeng-pmm1	SNP	ti	map_l125_m1_e0	het	99.2306	98.8613	99.6028	70.2477	18058	208	18054	72	18	25.0000
hfeng-pmm1	SNP	ti	map_l125_m1_e0	hetalt	100.0000	100.0000	100.0000	71.0843	24	0	24	0	0
hfeng-pmm1	SNP	ti	map_l125_m1_e0	homalt	99.8143	99.7827	99.8460	66.1307	11021	24	11021	17	7	41.1765
hfeng-pmm1	SNP	ti	map_l125_m2_e0	*	99.4583	99.2167	99.7011	70.4657	30021	237	30017	90	25	27.7778
hfeng-pmm1	SNP	ti	map_l125_m2_e0	het	99.2396	98.8716	99.6103	71.4782	18663	213	18659	73	18	24.6575
hfeng-pmm1	SNP	ti	map_l125_m2_e0	hetalt	100.0000	100.0000	100.0000	75.7576	24	0	24	0	0
hfeng-pmm1	SNP	ti	map_l125_m2_e0	homalt	99.8195	99.7887	99.8502	68.6124	11334	24	11334	17	7	41.1765
hfeng-pmm1	SNP	ti	map_l125_m2_e1	*	99.4622	99.2247	99.7008	70.5014	30332	237	30328	91	25	27.4725
hfeng-pmm1	SNP	ti	map_l125_m2_e1	het	99.2454	98.8841	99.6094	71.5149	18874	213	18870	74	18	24.3243
hfeng-pmm1	SNP	ti	map_l125_m2_e1	hetalt	100.0000	100.0000	100.0000	75.7576	24	0	24	0	0
hfeng-pmm1	SNP	ti	map_l125_m2_e1	homalt	99.8210	99.7905	99.8515	68.6411	11434	24	11434	17	7	41.1765
hfeng-pmm1	SNP	ti	map_l150_m0_e0	*	99.1145	98.9696	99.2598	79.4196	7780	81	7778	58	12	20.6897
hfeng-pmm1	SNP	ti	map_l150_m0_e0	het	98.8393	98.5874	99.0925	80.9472	5025	72	5023	46	8	17.3913
hfeng-pmm1	SNP	ti	map_l150_m0_e0	hetalt	100.0000	100.0000	100.0000	90.3226	3	0	3	0	0
hfeng-pmm1	SNP	ti	map_l150_m0_e0	homalt	99.6199	99.6740	99.5658	75.8370	2752	9	2752	12	4	33.3333
hfeng-pmm1	SNP	ti	map_l150_m1_e0	*	99.3490	99.1071	99.5921	73.5929	19536	176	19532	80	23	28.7500
hfeng-pmm1	SNP	ti	map_l150_m1_e0	het	99.0951	98.7227	99.4704	74.9167	12212	158	12208	65	17	26.1538
hfeng-pmm1	SNP	ti	map_l150_m1_e0	hetalt	100.0000	100.0000	100.0000	76.5625	15	0	15	0	0
hfeng-pmm1	SNP	ti	map_l150_m1_e0	homalt	99.7748	99.7543	99.7952	71.0227	7309	18	7309	15	6	40.0000
hfeng-pmm1	SNP	ti	map_l150_m2_e0	*	99.3647	99.1322	99.5983	75.0541	20334	178	20330	82	23	28.0488
hfeng-pmm1	SNP	ti	map_l150_m2_e0	het	99.1156	98.7579	99.4759	76.0299	12721	160	12717	67	17	25.3731
hfeng-pmm1	SNP	ti	map_l150_m2_e0	hetalt	100.0000	100.0000	100.0000	79.7297	15	0	15	0	0
hfeng-pmm1	SNP	ti	map_l150_m2_e0	homalt	99.7833	99.7637	99.8030	73.2106	7598	18	7598	15	6	40.0000
hfeng-pmm1	SNP	ti	map_l150_m2_e1	*	99.3663	99.1362	99.5975	75.1263	20544	179	20540	83	23	27.7108
hfeng-pmm1	SNP	ti	map_l150_m2_e1	het	99.1170	98.7630	99.4736	76.1158	12854	161	12850	68	17	25.0000
hfeng-pmm1	SNP	ti	map_l150_m2_e1	hetalt	100.0000	100.0000	100.0000	79.7297	15	0	15	0	0
hfeng-pmm1	SNP	ti	map_l150_m2_e1	homalt	99.7855	99.7660	99.8049	73.2531	7675	18	7675	15	6	40.0000
hfeng-pmm1	SNP	ti	map_l250_m0_e0	*	98.2865	98.3942	98.1792	92.9532	1348	22	1348	25	5	20.0000
hfeng-pmm1	SNP	ti	map_l250_m0_e0	het	97.9133	97.9657	97.8610	93.2569	915	19	915	20	3	15.0000

PrecisionFDA Truth Challenge

PrecisionFDA
Truth Challenge