PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryType SubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
401-450 / 86044 show all
rpoplin-dv42SNP*segduphomalt
99.8140
99.8883
99.7398
89.1939
1073112107312828
100.0000
rpoplin-dv42SNP*segduphetalt
100.0000
100.0000
100.0000
98.3834
70700
rpoplin-dv42SNP*segduphet
99.7082
99.6651
99.7514
90.3344
172595817253433
6.9767
rpoplin-dv42SNP*segdup*
99.7488
99.7506
99.7470
89.9398
2799770279917131
43.6620
rpoplin-dv42SNP*map_sirenhomalt
99.7831
99.6882
99.8783
53.6066
54984172549836763
94.0299
rpoplin-dv42SNP*map_sirenhetalt
98.1818
100.0000
96.4286
79.8561
8108133
100.0000
rpoplin-dv42SNP*map_sirenhet
99.5263
99.4010
99.6518
54.9841
9044654590433316159
50.3165
rpoplin-dv42SNP*map_siren*
99.6224
99.5097
99.7354
54.5067
145511717145497386225
58.2902
rpoplin-dv42SNP*map_l250_m2_e1homalt
98.7018
97.9029
99.5138
87.8305
26615726611313
100.0000
rpoplin-dv42SNP*map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
95.8333
50500
rpoplin-dv42SNP*map_l250_m2_e1het
98.1365
98.0433
98.2299
88.1941
516110351619357
61.2903
rpoplin-dv42SNP*map_l250_m2_e1*
98.3291
97.9967
98.6638
88.0879
7827160782710670
66.0377
rpoplin-dv42SNP*map_l250_m2_e0homalt
98.7237
97.9151
99.5458
87.7612
26305626301212
100.0000
rpoplin-dv42SNP*map_l250_m2_e0hetalt
100.0000
100.0000
100.0000
95.8333
50500
rpoplin-dv42SNP*map_l250_m2_e0het
98.1499
98.0554
98.2446
88.1117
509310150939156
61.5385
rpoplin-dv42SNP*map_l250_m2_e0*
98.3456
98.0089
98.6847
88.0100
7728157772810368
66.0194
rpoplin-dv42SNP*map_l250_m1_e0homalt
98.6481
97.7670
99.5453
86.6597
24085524081111
100.0000
rpoplin-dv42SNP*map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
95.8333
40400
rpoplin-dv42SNP*map_l250_m1_e0het
98.0000
97.8970
98.1033
87.6817
465510046559055
61.1111
rpoplin-dv42SNP*map_l250_m1_e0*
98.2210
97.8538
98.5910
87.3689
7067155706710166
65.3465
rpoplin-dv42SNP*map_l250_m0_e0homalt
97.8208
96.3434
99.3443
91.6882
6062360644
100.0000
rpoplin-dv42SNP*map_l250_m0_e0hetalt
0.0000
100.0000
00000
rpoplin-dv42SNP*map_l250_m0_e0het
97.3404
97.2112
97.4700
92.1200
14644214643823
60.5263
rpoplin-dv42SNP*map_l250_m0_e0*
97.4806
96.9555
98.0114
92.0139
20706520704227
64.2857
rpoplin-dv42SNP*map_l150_m2_e1homalt
99.3508
98.9854
99.7189
73.6505
11707120117073332
96.9697
rpoplin-dv42SNP*map_l150_m2_e1hetalt
93.0233
100.0000
86.9565
88.8889
2002033
100.0000
rpoplin-dv42SNP*map_l150_m2_e1het
98.9259
98.8361
99.0157
75.7529
2012623720120200117
58.5000
rpoplin-dv42SNP*map_l150_m2_e1*
99.0777
98.8916
99.2644
75.0455
3185335731847236152
64.4068
rpoplin-dv42SNP*map_l150_m2_e0homalt
99.3437
98.9743
99.7158
73.6127
11579120115793332
96.9697
rpoplin-dv42SNP*map_l150_m2_e0hetalt
93.0233
100.0000
86.9565
88.7255
2002033
100.0000
rpoplin-dv42SNP*map_l150_m2_e0het
98.9235
98.8328
99.0144
75.6918
1989823519892198117
59.0909
rpoplin-dv42SNP*map_l150_m2_e0*
99.0736
98.8855
99.2624
74.9915
3149735531491234152
64.9573
rpoplin-dv42SNP*map_l150_m1_e0homalt
99.3277
98.9444
99.7139
71.2907
11154119111543231
96.8750
rpoplin-dv42SNP*map_l150_m1_e0hetalt
93.0233
100.0000
86.9565
87.1508
2002033
100.0000
rpoplin-dv42SNP*map_l150_m1_e0het
98.8884
98.7989
98.9780
74.2870
1908423219078197116
58.8832
rpoplin-dv42SNP*map_l150_m1_e0*
99.0457
98.8533
99.2389
73.2840
3025835130252232150
64.6552
rpoplin-dv42SNP*map_l150_m0_e0homalt
98.7551
97.9702
99.5527
75.0450
40068340061817
94.4444
rpoplin-dv42SNP*map_l150_m0_e0hetalt
75.0000
100.0000
60.0000
94.1176
30322
100.0000
rpoplin-dv42SNP*map_l150_m0_e0het
98.3050
98.2620
98.3480
79.4809
7802138779913182
62.5954
rpoplin-dv42SNP*map_l150_m0_e0*
98.4495
98.1632
98.7374
78.1997
1181122111808151101
66.8874
rpoplin-dv42SNP*map_l125_m2_e1homalt
99.5110
99.2471
99.7764
69.2363
17400132174003938
97.4359
rpoplin-dv42SNP*map_l125_m2_e1hetalt
95.2381
100.0000
90.9091
86.6397
3003033
100.0000
rpoplin-dv42SNP*map_l125_m2_e1het
99.1114
98.9777
99.2454
71.6791
2933730329331223129
57.8475
rpoplin-dv42SNP*map_l125_m2_e1*
99.2571
99.0784
99.4365
70.8435
4676743546761265170
64.1509
rpoplin-dv42SNP*map_l125_m2_e0homalt
99.5066
99.2403
99.7743
69.1861
17243132172433938
97.4359
rpoplin-dv42SNP*map_l125_m2_e0hetalt
95.2381
100.0000
90.9091
86.5854
3003033
100.0000
rpoplin-dv42SNP*map_l125_m2_e0het
99.1051
98.9733
99.2372
71.6337
2901730129011223129
57.8475
rpoplin-dv42SNP*map_l125_m2_e0*
99.2517
99.0733
99.4307
70.7955
4629043346284265170
64.1509
rpoplin-dv42SNP*map_l125_m1_e0homalt
99.4988
99.2251
99.7740
66.6415
16774131167743837
97.3684
rpoplin-dv42SNP*map_l125_m1_e0hetalt
95.2381
100.0000
90.9091
84.5794
3003033
100.0000