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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1688 1689 1690 1691 1692 1693 1694 1695 1696 ... 1720 1721 » 84551-84600 / 86044 show all
astatham-gatk	SNP	ti	map_l250_m0_e0	hetalt		0.0000		100.0000	0	0	0	0	0
astatham-gatk	SNP	ti	map_l250_m0_e0	homalt	98.2578	97.0183	99.5294	90.9651	423	13	423	2	2	100.0000
astatham-gatk	SNP	ti	map_l250_m1_e0	*	92.9011	87.3116	99.2552	90.3133	3998	581	3998	30	12	40.0000
astatham-gatk	SNP	ti	map_l250_m1_e0	het	89.5242	81.7722	98.8998	92.0567	2427	541	2427	27	9	33.3333
astatham-gatk	SNP	ti	map_l250_m1_e0	hetalt	100.0000	100.0000	100.0000	84.0000	4	0	4	0	0
astatham-gatk	SNP	ti	map_l250_m1_e0	homalt	98.6465	97.5109	99.8089	85.2776	1567	40	1567	3	3	100.0000
astatham-gatk	SNP	ti	map_l250_m2_e0	*	92.8085	87.1006	99.3169	90.7841	4362	646	4362	30	12	40.0000
astatham-gatk	SNP	ti	map_l250_m2_e0	het	89.3237	81.3768	98.9907	92.3822	2648	606	2648	27	9	33.3333
astatham-gatk	SNP	ti	map_l250_m2_e0	hetalt	100.0000	100.0000	100.0000	82.7586	5	0	5	0	0
astatham-gatk	SNP	ti	map_l250_m2_e0	homalt	98.7576	97.7130	99.8248	86.3182	1709	40	1709	3	3	100.0000
astatham-gatk	SNP	ti	map_l250_m2_e1	*	92.8549	87.1749	99.3266	90.8364	4425	651	4425	30	12	40.0000
astatham-gatk	SNP	ti	map_l250_m2_e1	het	89.3914	81.4792	99.0055	92.4310	2688	611	2688	27	9	33.3333
astatham-gatk	SNP	ti	map_l250_m2_e1	hetalt	100.0000	100.0000	100.0000	82.7586	5	0	5	0	0
astatham-gatk	SNP	ti	map_l250_m2_e1	homalt	98.7739	97.7427	99.8271	86.3568	1732	40	1732	3	3	100.0000
astatham-gatk	SNP	ti	map_siren	*	94.0656	88.8705	99.9059	56.9785	89186	11169	89171	84	46	54.7619
astatham-gatk	SNP	ti	map_siren	het	90.2825	82.3747	99.8698	61.4644	51387	10995	51378	67	30	44.7761
astatham-gatk	SNP	ti	map_siren	hetalt	99.1150	98.2456	100.0000	68.0000	56	1	56	0	0
astatham-gatk	SNP	ti	map_siren	homalt	99.7489	99.5437	99.9550	48.8366	37743	173	37737	17	16	94.1176
astatham-gatk	SNP	ti	segdup	*	99.2327	98.6385	99.8342	89.7728	19271	266	19269	32	6	18.7500
astatham-gatk	SNP	ti	segdup	het	98.8338	97.9219	99.7628	90.8470	11780	250	11778	28	2	7.1429
astatham-gatk	SNP	ti	segdup	hetalt	100.0000	100.0000	100.0000	98.5294	2	0	2	0	0
astatham-gatk	SNP	ti	segdup	homalt	99.8666	99.7868	99.9466	87.4281	7489	16	7489	4	4	100.0000
astatham-gatk	SNP	ti	segdupwithalt	*		0.0000		100.0000	0	0	0	0	0
astatham-gatk	SNP	ti	segdupwithalt	het		0.0000		100.0000	0	0	0	0	0
astatham-gatk	SNP	ti	segdupwithalt	hetalt		0.0000		100.0000	0	0	0	0	0
astatham-gatk	SNP	ti	segdupwithalt	homalt		0.0000		100.0000	0	0	0	0	0
astatham-gatk	SNP	ti	tech_badpromoters	*	98.2249	97.6471	98.8095	45.0980	83	2	83	1	1	100.0000
astatham-gatk	SNP	ti	tech_badpromoters	het	97.6744	95.4545	100.0000	48.1481	42	2	42	0	0
astatham-gatk	SNP	ti	tech_badpromoters	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	SNP	ti	tech_badpromoters	homalt	98.7952	100.0000	97.6190	41.6667	41	0	41	1	1	100.0000
astatham-gatk	SNP	tv	*	*	99.5449	99.1184	99.9751	22.0764	961141	8549	961059	239	61	25.5230
astatham-gatk	SNP	tv	*	het	99.2722	98.5893	99.9647	23.3815	583349	8347	583282	206	35	16.9903
astatham-gatk	SNP	tv	*	hetalt	99.7699	99.5408	100.0000	40.6164	867	4	867	0	0
astatham-gatk	SNP	tv	*	homalt	99.9694	99.9475	99.9912	19.9071	376925	198	376910	33	26	78.7879
astatham-gatk	SNP	tv	HG002complexvar	*	99.1122	98.2547	99.9847	22.3181	241856	4296	241769	37	21	56.7568
astatham-gatk	SNP	tv	HG002complexvar	het	98.5778	97.2116	99.9829	21.9634	146528	4203	146456	25	11	44.0000
astatham-gatk	SNP	tv	HG002complexvar	hetalt	99.6764	99.3548	100.0000	35.9667	308	2	308	0	0
astatham-gatk	SNP	tv	HG002complexvar	homalt	99.9458	99.9043	99.9874	22.8056	95020	91	95005	12	10	83.3333
astatham-gatk	SNP	tv	HG002compoundhet	*	99.1767	98.5543	99.8069	49.0836	8794	129	8789	17	16	94.1176
astatham-gatk	SNP	tv	HG002compoundhet	het	98.5818	97.4321	99.7590	55.5988	4553	120	4553	11	11	100.0000
astatham-gatk	SNP	tv	HG002compoundhet	hetalt	99.7674	99.5360	100.0000	22.4932	858	4	858	0	0
astatham-gatk	SNP	tv	HG002compoundhet	homalt	99.8376	99.8524	99.8227	42.7314	3383	5	3378	6	5	83.3333
astatham-gatk	SNP	tv	decoy	*		0.0000		100.0000	0	0	0	0	0
astatham-gatk	SNP	tv	decoy	het		0.0000		100.0000	0	0	0	0	0
astatham-gatk	SNP	tv	decoy	hetalt		0.0000		100.0000	0	0	0	0	0
astatham-gatk	SNP	tv	decoy	homalt		0.0000		100.0000	0	0	0	0	0
astatham-gatk	SNP	tv	func_cds	*	99.8283	99.7483	99.9083	29.1951	4360	11	4359	4	0	0.0000
astatham-gatk	SNP	tv	func_cds	het	99.7173	99.5860	99.8490	31.6916	2646	11	2645	4	0	0.0000
astatham-gatk	SNP	tv	func_cds	hetalt	100.0000	100.0000	100.0000	56.5217	10	0	10	0	0
astatham-gatk	SNP	tv	func_cds	homalt	100.0000	100.0000	100.0000	24.6351	1704	0	1704	0	0

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