PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TP Truth FNQuery TPQuery FPFP gt% FP ma
85451-85500 / 86044 show all
gduggal-snapplatSNPtiHG002complexvarhomalt
99.0919
98.3790
99.8152
19.4474
1903283136190130352203
57.6705
gduggal-bwavardINDEL**het
89.1538
98.0771
81.7188
63.1804
19040037331901274253338764
91.1386
mlin-fermikitSNPtiHG002complexvarhomalt
98.3813
98.4958
98.2669
18.8239
190554291019057233613261
97.0247
qzeng-customINDEL**het
97.1762
98.2811
96.0960
58.8639
190796333721769188443946
44.6178
qzeng-customSNPtiHG002complexvarhomalt
99.2303
98.6432
99.8245
18.6252
1908392625186005327247
75.5352
ckim-gatkSNPtiHG002complexvarhomalt
99.3341
98.6902
99.9864
18.4846
19092925341909192623
88.4615
jmaeng-gatkSNPtiHG002complexvarhomalt
99.3419
98.7072
99.9848
18.4737
19096225011909522926
89.6552
ghariani-varprowlINDEL**het
89.6326
98.5731
82.1789
64.2989
19136127701914494151738150
91.8901
ltrigg-rtg1INDEL**het
99.1142
98.5886
99.6455
55.1307
1913932740190584678162
23.8938
asubramanian-gatkINDEL**het
98.9698
98.6849
99.2562
61.7813
19158025531912381433589
41.1026
ciseli-customSNPtiHG002complexvarhomalt
96.5088
99.0536
94.0915
19.4065
1916331831189105118755178
43.6042
ndellapenna-hhgaINDEL**het
97.8590
98.8060
96.9301
56.3967
191815231819332861235425
88.6004
cchapple-customINDEL**het
99.2026
98.9188
99.4881
58.0034
19203420992388471229782
63.6290
egarrison-hhgaINDEL**het
97.8735
98.9564
96.8141
57.0135
192107202619318163575653
88.9256
raldana-dualsentieonINDEL**het
99.3035
99.0228
99.5858
57.9096
1922361897191867798611
76.5664
hfeng-pmm2INDEL**het
99.3911
99.1521
99.6313
58.9414
1924871646192126711412
57.9466
ltrigg-rtg2INDEL**het
99.3348
99.1568
99.5135
56.1055
1924961637191657937230
24.5464
hfeng-pmm1INDEL**het
99.4245
99.1923
99.6578
58.3471
1925651568192194660374
56.6667
hfeng-pmm3INDEL**het
99.4705
99.1923
99.7504
58.0356
1925651568192191481313
65.0728
jli-customINDEL**het
99.5119
99.3015
99.7232
58.0133
1927771356192389534340
63.6704
rpoplin-dv42INDEL**het
99.0459
99.3340
98.7595
59.2937
192840129319274924212250
92.9368
cchapple-customSNPtiHG002complexvarhomalt
99.8348
99.6852
99.9849
17.4009
1928546091921842925
86.2069
gduggal-snapfbSNPtiHG002complexvarhomalt
99.6542
99.7054
99.6030
19.3776
192894570192940769240
31.2094
jlack-gatkINDEL**het
98.8624
99.4076
98.3232
61.7242
192983115019262332851088
33.1202
jmaeng-gatkINDEL**het
99.3015
99.4880
99.1156
62.5254
1931399941927701720614
35.6977
ltrigg-rtg1SNPtiHG002complexvarhomalt
99.9028
99.8341
99.9715
18.2456
1931423211930495554
98.1818
gduggal-bwafbSNPtiHG002complexvarhomalt
99.8904
99.8351
99.9457
18.2578
19314531919315910588
83.8095
ndellapenna-hhgaSNPtiHG002complexvarhomalt
99.8705
99.8403
99.9007
18.4130
193154309193175192171
89.0625
astatham-gatkINDEL**het
99.5127
99.4973
99.5281
60.7701
193157976192779914573
62.6915
egarrison-hhgaSNPtiHG002complexvarhomalt
99.8937
99.8480
99.9395
18.4037
19316929419318811794
80.3419
ckim-vqsrINDEL**het
99.5204
99.5086
99.5323
62.3713
193179954192796906561
61.9205
ltrigg-rtg2SNPtiHG002complexvarhomalt
99.9240
99.8739
99.9741
18.1301
1932192441931175049
98.0000
jlack-gatkSNPtiHG002complexvarhomalt
99.9491
99.9163
99.9819
18.2375
1933011621932903532
91.4286
eyeh-varpipeSNPtiHG002complexvarhomalt
99.9332
99.9188
99.9475
17.3280
1933071571807989569
72.6316
astatham-gatkSNPtiHG002complexvarhomalt
99.9545
99.9214
99.9876
18.3169
1933111521933012424
100.0000
ckim-dragenSNPtiHG002complexvarhomalt
99.9527
99.9214
99.9840
18.3095
1933111521934173131
100.0000
ckim-dragenINDEL**het
99.4503
99.5962
99.3048
61.2221
1933497841928411350335
24.8148
dgrover-gatkSNPtiHG002complexvarhomalt
99.9661
99.9447
99.9876
18.3249
1933561071933462424
100.0000
ghariani-varprowlSNPtiHG002complexvarhomalt
99.7133
99.9473
99.4805
19.5938
1933591021934051010705
69.8020
jli-customSNPtiHG002complexvarhomalt
99.9648
99.9478
99.9819
18.3860
1933621011933563526
74.2857
jpowers-varprowlSNPtiHG002complexvarhomalt
99.7216
99.9488
99.4954
19.7390
19336499193412981709
72.2732
bgallagher-sentieonSNPtiHG002complexvarhomalt
99.9695
99.9514
99.9876
18.3190
193369941933592424
100.0000
rpoplin-dv42SNPtiHG002complexvarhomalt
99.9574
99.9530
99.9617
18.4113
193372911933677472
97.2973
raldana-dualsentieonSNPtiHG002complexvarhomalt
99.9811
99.9726
99.9897
18.3281
193410531934012020
100.0000
hfeng-pmm2SNPtiHG002complexvarhomalt
99.9798
99.9757
99.9840
18.5051
193416471934073131
100.0000
hfeng-pmm3SNPtiHG002complexvarhomalt
99.9848
99.9773
99.9922
18.4374
193419441934091515
100.0000
hfeng-pmm1SNPtiHG002complexvarhomalt
99.9845
99.9798
99.9891
18.4732
193424391934162121
100.0000
bgallagher-sentieonINDEL**het
99.5620
99.6441
99.4801
60.4341
1934426911930721009623
61.7443
dgrover-gatkINDEL**het
99.5990
99.6559
99.5422
61.2168
193465668193091888555
62.5000
ckim-gatkINDEL**het
99.4669
99.6616
99.2730
62.2737
1934766571930951414578
40.8769