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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1694 1695 1696 1697 1698 1699 1700 1701 1702 ... 1720 1721 » 84851-84900 / 86044 show all
gduggal-snapplat	SNP	ti	map_siren	het	96.8090	96.4253	97.1959	70.5211	60152	2230	60242	1738	830	47.7560
asubramanian-gatk	INDEL	I1_5	*	homalt	99.5606	99.5449	99.5763	55.0778	60153	275	60163	256	247	96.4844
ltrigg-rtg2	INDEL	I1_5	*	homalt	99.7495	99.5797	99.9200	48.8836	60173	254	59955	48	38	79.1667
ltrigg-rtg1	INDEL	I1_5	*	homalt	99.7620	99.6227	99.9017	50.6392	60199	228	59978	59	47	79.6610
ndellapenna-hhga	INDEL	D1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	93.9899	93.5543	94.4295	71.2140	60278	4153	60365	3561	3233	90.7891
hfeng-pmm1	INDEL	I1_5	*	homalt	99.7725	99.7799	99.7651	52.5960	60295	133	60299	142	137	96.4789
ckim-dragen	INDEL	I1_5	*	homalt	99.5565	99.7948	99.3194	55.1956	60304	124	60271	413	409	99.0315
jlack-gatk	INDEL	I1_5	*	homalt	99.5330	99.8014	99.2660	55.8866	60308	120	60314	446	434	97.3094
hfeng-pmm3	INDEL	I1_5	*	homalt	99.7866	99.8014	99.7717	52.1729	60308	120	60313	138	134	97.1014
cchapple-custom	INDEL	I1_5	*	homalt	99.7155	99.8147	99.6166	51.9774	60316	112	59755	230	228	99.1304
hfeng-pmm2	INDEL	I1_5	*	homalt	99.7668	99.8262	99.7075	52.8322	60323	105	60327	177	174	98.3051
ckim-vqsr	INDEL	I1_5	*	homalt	99.7099	99.8312	99.5890	55.2277	60326	102	60332	249	247	99.1968
ckim-gatk	INDEL	I1_5	*	homalt	99.7125	99.8428	99.5825	55.2232	60333	95	60339	253	249	98.4190
raldana-dualsentieon	INDEL	I1_5	*	homalt	99.6902	99.8428	99.5381	54.0742	60333	95	60337	280	279	99.6429
jmaeng-gatk	INDEL	I1_5	*	homalt	99.7149	99.8444	99.5857	55.4032	60334	94	60340	251	245	97.6096
jli-custom	INDEL	I1_5	*	homalt	99.8065	99.8527	99.7603	53.8126	60339	89	60343	145	140	96.5517
astatham-gatk	INDEL	I1_5	*	homalt	99.7125	99.8544	99.5710	55.1217	60340	88	60345	260	257	98.8462
dgrover-gatk	INDEL	I1_5	*	homalt	99.7224	99.8577	99.5874	55.4630	60342	86	60347	250	246	98.4000
bgallagher-sentieon	INDEL	I1_5	*	homalt	99.6433	99.8593	99.4283	55.0054	60343	85	60348	347	343	98.8473
gduggal-bwavard	SNP	ti	map_siren	het	96.4374	96.7603	96.1167	68.4382	60361	2021	59849	2418	250	10.3391
egarrison-hhga	INDEL	D1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	93.9659	93.6956	94.2379	71.6964	60369	4062	60447	3696	3375	91.3149
ciseli-custom	SNP	*	map_l100_m2_e0	*	85.1771	81.9318	88.6900	71.8362	60600	13364	60413	7704	2033	26.3889
gduggal-snapfb	INDEL	D1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	94.5807	94.0681	95.0990	73.7052	60609	3822	61530	3171	1742	54.9354
ckim-gatk	SNP	*	map_l100_m2_e0	*	89.4294	82.0710	98.2373	79.5869	60703	13261	60692	1089	86	7.8972
jmaeng-gatk	SNP	*	map_l100_m2_e0	*	89.4136	82.0994	98.1585	79.7900	60724	13240	60713	1139	79	6.9359
jpowers-varprowl	SNP	ti	map_siren	het	98.2302	97.8231	98.6406	61.2920	61024	1358	61026	841	198	23.5434
ckim-isaac	INDEL	D1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	96.4197	94.8503	98.0420	61.5230	61113	3318	60987	1218	972	79.8030
ciseli-custom	SNP	*	map_l100_m2_e1	*	85.2411	82.0102	88.7370	71.8319	61292	13445	61099	7755	2048	26.4088
ckim-gatk	SNP	*	map_l100_m2_e1	*	89.5170	82.2096	98.2503	79.5686	61441	13296	61430	1094	86	7.8611
jmaeng-gatk	SNP	*	map_l100_m2_e1	*	89.5016	82.2404	98.1693	79.7702	61464	13273	61453	1146	79	6.8935
cchapple-custom	SNP	ti	map_siren	het	98.0329	98.5813	97.4906	61.4640	61497	885	61538	1584	362	22.8535
gduggal-snapfb	SNP	ti	map_siren	het	98.2591	98.8009	97.7232	58.6413	61634	748	61636	1436	494	34.4011
ltrigg-rtg2	SNP	ti	map_siren	het	99.2569	98.8202	99.6976	45.2238	61645	736	61646	187	11	5.8824
astatham-gatk	SNP	*	map_l100_m1_e0	*	91.9136	85.1664	99.8219	69.0267	61663	10740	61652	110	52	47.2727
ndellapenna-hhga	SNP	ti	map_siren	het	99.3687	98.9067	99.8350	52.2716	61700	682	61701	102	39	38.2353
ltrigg-rtg1	SNP	ti	map_siren	het	99.2961	98.9388	99.6561	47.8678	61719	662	61718	213	10	4.6948
ciseli-custom	INDEL	*	HG002complexvar	*	81.0665	80.3871	81.7575	57.5412	61845	15089	61574	13739	8055	58.6287
egarrison-hhga	SNP	ti	map_siren	het	99.5580	99.2867	99.8308	53.2460	61937	445	61938	105	38	36.1905
gduggal-bwafb	SNP	ti	map_siren	het	99.0568	99.3219	98.7930	59.4400	61959	423	61963	757	131	17.3052
hfeng-pmm1	SNP	ti	map_siren	het	99.5806	99.3331	99.8292	52.2251	61966	416	61957	106	24	22.6415
ghariani-varprowl	SNP	ti	map_siren	het	98.6913	99.3636	98.0280	62.9270	61985	397	61987	1247	191	15.3168
raldana-dualsentieon	SNP	ti	map_siren	het	99.3661	99.3941	99.3382	55.1273	62004	378	61995	413	8	1.9371
rpoplin-dv42	SNP	ti	map_siren	het	99.5664	99.3973	99.7362	53.8516	62006	376	61997	164	94	57.3171
jlack-gatk	SNP	ti	map_siren	het	97.5925	99.4357	95.8164	66.8895	62030	352	62021	2708	216	7.9764
jli-custom	SNP	ti	map_siren	het	99.5420	99.4806	99.6035	52.5864	62058	324	62054	247	50	20.2429
hfeng-pmm2	SNP	ti	map_siren	het	99.5502	99.5223	99.5781	56.1068	62084	298	62075	263	19	7.2243
ckim-dragen	SNP	ti	map_siren	het	98.6081	99.5319	97.7013	60.9808	62090	292	62097	1461	137	9.3771
hfeng-pmm3	SNP	ti	map_siren	het	99.6838	99.5672	99.8007	53.2950	62112	270	62103	124	11	8.8710
dgrover-gatk	SNP	ti	map_siren	het	99.5897	99.6105	99.5689	58.1271	62139	243	62130	269	51	18.9591
bgallagher-sentieon	SNP	ti	map_siren	het	99.4766	99.6377	99.3160	56.6817	62156	226	62147	428	50	11.6822

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