PrecisionFDA
Truth Challenge
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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
| Entry | Type | Subtype | Subset | Genotype | F-score | Recall | Precision | Frac_NA | Truth TP | Truth FN | Query TP | Query FP | FP gt | % FP ma | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
85051-85100 / 86044 show all | |||||||||||||||
| eyeh-varpipe | INDEL | D16_PLUS | lowcmp_SimpleRepeat_diTR_gt200 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| eyeh-varpipe | INDEL | D16_PLUS | lowcmp_SimpleRepeat_diTR_gt200 | homalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| eyeh-varpipe | INDEL | D16_PLUS | lowcmp_SimpleRepeat_quadTR_gt200 | * | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| eyeh-varpipe | INDEL | D16_PLUS | lowcmp_SimpleRepeat_quadTR_gt200 | het | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| eyeh-varpipe | INDEL | D16_PLUS | lowcmp_SimpleRepeat_quadTR_gt200 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| eyeh-varpipe | INDEL | D16_PLUS | lowcmp_SimpleRepeat_quadTR_gt200 | homalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| eyeh-varpipe | INDEL | D16_PLUS | lowcmp_SimpleRepeat_triTR_gt200 | * | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| eyeh-varpipe | INDEL | D16_PLUS | lowcmp_SimpleRepeat_triTR_gt200 | het | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| eyeh-varpipe | INDEL | D16_PLUS | lowcmp_SimpleRepeat_triTR_gt200 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| eyeh-varpipe | INDEL | D16_PLUS | lowcmp_SimpleRepeat_triTR_gt200 | homalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| eyeh-varpipe | INDEL | D16_PLUS | map_l125_m0_e0 | homalt | 80.0000 | 100.0000 | 66.6667 | 94.1176 | 2 | 0 | 2 | 1 | 1 | 100.0000 | |
| eyeh-varpipe | INDEL | D16_PLUS | map_l150_m0_e0 | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| eyeh-varpipe | INDEL | D16_PLUS | map_l150_m0_e0 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| eyeh-varpipe | INDEL | D16_PLUS | map_l150_m1_e0 | homalt | 0.0000 | 0.0000 | 98.3871 | 0 | 0 | 0 | 1 | 1 | 100.0000 | ||
| eyeh-varpipe | INDEL | D16_PLUS | map_l150_m2_e0 | homalt | 0.0000 | 0.0000 | 98.4848 | 0 | 0 | 0 | 1 | 1 | 100.0000 | ||
| eyeh-varpipe | INDEL | D16_PLUS | map_l150_m2_e1 | homalt | 0.0000 | 0.0000 | 98.5075 | 0 | 0 | 0 | 1 | 1 | 100.0000 | ||
| eyeh-varpipe | INDEL | D16_PLUS | map_l250_m0_e0 | * | 100.0000 | 100.0000 | 100.0000 | 98.1132 | 1 | 0 | 1 | 0 | 0 | ||
| eyeh-varpipe | INDEL | D16_PLUS | map_l250_m0_e0 | het | 100.0000 | 100.0000 | 100.0000 | 96.2963 | 1 | 0 | 1 | 0 | 0 | ||
| eyeh-varpipe | INDEL | D16_PLUS | map_l250_m0_e0 | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| eyeh-varpipe | INDEL | D16_PLUS | map_l250_m0_e0 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| eyeh-varpipe | INDEL | D16_PLUS | map_l250_m1_e0 | het | 100.0000 | 100.0000 | 100.0000 | 93.3333 | 3 | 0 | 3 | 0 | 0 | ||
| eyeh-varpipe | INDEL | D16_PLUS | map_l250_m1_e0 | homalt | 0.0000 | 0.0000 | 97.2222 | 0 | 0 | 0 | 1 | 1 | 100.0000 | ||
| eyeh-varpipe | INDEL | D16_PLUS | map_l250_m2_e0 | het | 100.0000 | 100.0000 | 100.0000 | 93.7500 | 3 | 0 | 3 | 0 | 0 | ||
| eyeh-varpipe | INDEL | D16_PLUS | map_l250_m2_e0 | homalt | 66.6667 | 100.0000 | 50.0000 | 95.0000 | 1 | 0 | 1 | 1 | 1 | 100.0000 | |
| eyeh-varpipe | INDEL | D16_PLUS | map_l250_m2_e1 | het | 100.0000 | 100.0000 | 100.0000 | 93.7500 | 3 | 0 | 3 | 0 | 0 | ||
| eyeh-varpipe | INDEL | D16_PLUS | map_l250_m2_e1 | homalt | 66.6667 | 100.0000 | 50.0000 | 95.1220 | 1 | 0 | 1 | 1 | 1 | 100.0000 | |
| eyeh-varpipe | INDEL | D16_PLUS | segdupwithalt | * | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| eyeh-varpipe | INDEL | D16_PLUS | segdupwithalt | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| eyeh-varpipe | INDEL | D16_PLUS | segdupwithalt | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| eyeh-varpipe | INDEL | D16_PLUS | segdupwithalt | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| eyeh-varpipe | INDEL | D16_PLUS | tech_badpromoters | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| eyeh-varpipe | INDEL | D16_PLUS | tech_badpromoters | homalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 1 | 1 | 100.0000 | ||
| eyeh-varpipe | INDEL | D1_5 | decoy | * | 96.0000 | 100.0000 | 92.3077 | 99.7796 | 4 | 0 | 12 | 1 | 1 | 100.0000 | |
| eyeh-varpipe | INDEL | D1_5 | decoy | het | 100.0000 | 100.0000 | 100.0000 | 99.8141 | 2 | 0 | 7 | 0 | 0 | ||
| eyeh-varpipe | INDEL | D1_5 | decoy | hetalt | 100.0000 | 100.0000 | 100.0000 | 99.6732 | 1 | 0 | 1 | 0 | 0 | ||
| eyeh-varpipe | INDEL | D1_5 | decoy | homalt | 88.8889 | 100.0000 | 80.0000 | 99.7263 | 1 | 0 | 4 | 1 | 1 | 100.0000 | |
| eyeh-varpipe | INDEL | D1_5 | func_cds | het | 98.3051 | 100.0000 | 96.6667 | 34.3066 | 85 | 0 | 87 | 3 | 2 | 66.6667 | |
| eyeh-varpipe | INDEL | D1_5 | func_cds | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| eyeh-varpipe | INDEL | D1_5 | lowcmp_AllRepeats_gt200bp_gt95identity_merged | hetalt | 100.0000 | 100.0000 | 100.0000 | 98.7013 | 1 | 0 | 1 | 0 | 0 | ||
| eyeh-varpipe | INDEL | D1_5 | lowcmp_AllRepeats_gt200bp_gt95identity_merged | homalt | 86.9565 | 100.0000 | 76.9231 | 97.6059 | 2 | 0 | 10 | 3 | 3 | 100.0000 | |
| eyeh-varpipe | INDEL | D1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged | * | 94.5455 | 100.0000 | 89.6552 | 98.1931 | 10 | 0 | 26 | 3 | 3 | 100.0000 | |
| eyeh-varpipe | INDEL | D1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged | het | 100.0000 | 100.0000 | 100.0000 | 98.5075 | 7 | 0 | 15 | 0 | 0 | ||
| eyeh-varpipe | INDEL | D1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged | hetalt | 100.0000 | 100.0000 | 100.0000 | 98.5915 | 1 | 0 | 1 | 0 | 0 | ||
| eyeh-varpipe | INDEL | D1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged | homalt | 86.9565 | 100.0000 | 76.9231 | 97.5425 | 2 | 0 | 10 | 3 | 3 | 100.0000 | |
| eyeh-varpipe | INDEL | D1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| eyeh-varpipe | INDEL | D1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| eyeh-varpipe | INDEL | D1_5 | lowcmp_SimpleRepeat_diTR_gt200 | * | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| eyeh-varpipe | INDEL | D1_5 | lowcmp_SimpleRepeat_diTR_gt200 | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| eyeh-varpipe | INDEL | D1_5 | lowcmp_SimpleRepeat_diTR_gt200 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| eyeh-varpipe | INDEL | D1_5 | lowcmp_SimpleRepeat_diTR_gt200 | homalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||