PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FN Query TPQuery FPFP gt% FP ma
1-50 / 86044 show all
anovak-vgINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
98.3871
20100
anovak-vgINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDEL*lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
anovak-vgINDEL*lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
anovak-vgINDEL*lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDEL*lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
anovak-vgINDEL*lowcmp_SimpleRepeat_triTR_gt200*
0.0000
100.0000
00000
anovak-vgINDEL*lowcmp_SimpleRepeat_triTR_gt200het
0.0000
100.0000
00000
anovak-vgINDEL*lowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDEL*lowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
0.0000
0.0000
00000
anovak-vgINDEL*map_l250_m0_e0hetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDEL*segdupwithalt*
100.0000
100.0000
100.0000
99.9973
10100
anovak-vgINDEL*segdupwithalthet
100.0000
100.0000
100.0000
99.9956
10100
anovak-vgINDEL*segdupwithalthetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDEL*segdupwithalthomalt
0.0000
100.0000
00000
anovak-vgINDELC16_PLUS**
0.0000
0.0000
20.0000
90.1961
00140
0.0000
anovak-vgINDELC16_PLUS*het
0.0000
0.0000
25.0000
90.2439
00130
0.0000
anovak-vgINDELC16_PLUS*hetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELC16_PLUS*homalt
0.0000
0.0000
90.0000
00010
0.0000
anovak-vgINDELC16_PLUSHG002complexvar*
0.0000
0.0000
33.3333
85.7143
00120
0.0000
anovak-vgINDELC16_PLUSHG002complexvarhet
0.0000
0.0000
33.3333
83.3333
00120
0.0000
anovak-vgINDELC16_PLUSHG002complexvarhetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELC16_PLUSHG002complexvarhomalt
0.0000
100.0000
00000
anovak-vgINDELC16_PLUSHG002compoundhet*
0.0000
0.0000
87.5000
00010
0.0000
anovak-vgINDELC16_PLUSHG002compoundhethet
0.0000
0.0000
87.5000
00010
0.0000
anovak-vgINDELC16_PLUSHG002compoundhethetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELC16_PLUSHG002compoundhethomalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELC16_PLUSdecoy*
0.0000
100.0000
00000
anovak-vgINDELC16_PLUSdecoyhet
0.0000
100.0000
00000
anovak-vgINDELC16_PLUSdecoyhetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELC16_PLUSdecoyhomalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELC16_PLUSfunc_cds*
0.0000
0.0000
0.0000
00000
anovak-vgINDELC16_PLUSfunc_cdshet
0.0000
0.0000
0.0000
00000
anovak-vgINDELC16_PLUSfunc_cdshetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELC16_PLUSfunc_cdshomalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELC16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_merged*
0.0000
0.0000
83.3333
00010
0.0000
anovak-vgINDELC16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhet
0.0000
100.0000
00000
anovak-vgINDELC16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELC16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
0.0000
0.0000
50.0000
00010
0.0000
anovak-vgINDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
anovak-vgINDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
anovak-vgINDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_merged*
0.0000
0.0000
50.0000
84.6154
00110
0.0000
anovak-vgINDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
0.0000
0.0000
50.0000
80.0000
00110
0.0000
anovak-vgINDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
anovak-vgINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331*
0.0000
0.0000
50.0000
88.8889
00110
0.0000
anovak-vgINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331het
0.0000
0.0000
100.0000
93.3333
00100
anovak-vgINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
0.0000
0.0000
0.0000
00000