PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubset GenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
85201-85250 / 86044 show all
gduggal-bwavardINDELD16_PLUS**
63.4968
61.3502
65.7990
69.3353
41622622417121681906
87.9151
gduggal-bwavardINDELD16_PLUS*het
72.3037
95.0301
58.3494
71.4553
3002157302621601899
87.9167
gduggal-bwavardINDELD16_PLUS*hetalt
0.0000
0.3104
0.0000
0.0000
61927000
gduggal-bwavardINDELD16_PLUS*homalt
80.8672
68.2033
99.3062
53.9537
1154538114587
87.5000
gduggal-bwavardINDELD1_5**
90.6910
89.3918
92.0286
58.1851
13117815567129649112309891
88.0766
gduggal-bwavardINDELD1_5*het
93.4417
99.0111
88.4655
62.3753
8670886685823111909864
88.1501
gduggal-bwavardINDELD1_5*hetalt
0.0000
0.3904
0.0000
0.0000
4010205000
gduggal-bwavardINDELD1_5*homalt
95.1427
90.8106
99.9088
44.5205
444304496438264027
67.5000
gduggal-bwavardINDELC6_15**
79.7527
100.0000
66.3239
94.4109
7025813132
24.4275
gduggal-bwavardINDELC6_15*het
73.0769
100.0000
57.5758
94.9772
7017112630
23.8095
gduggal-bwavardINDELC6_15*hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDELC6_15*homalt
0.0000
0.0000
94.5652
91.2130
008752
40.0000
gduggal-bwavardINDELI1_5**
89.8158
87.7423
91.9898
54.5219
132196184681312061142510755
94.1357
gduggal-bwavardINDELI1_5*het
92.1214
97.7872
87.0762
61.9735
772921749768631140810744
94.1795
gduggal-bwavardINDELI1_5*hetalt
0.0000
0.5181
0.0000
0.0000
5811137000
gduggal-bwavardINDELI1_5*homalt
95.1435
90.7626
99.9687
33.2973
548465582543431711
64.7059
gduggal-bwavardINDELD6_15**
62.6145
59.4780
66.1003
55.5649
15519105731536778817658
97.1704
gduggal-bwavardINDELD6_15*het
73.6436
98.1194
58.9409
57.7838
113742181128678627644
97.2272
gduggal-bwavardINDELD6_15*hetalt
0.0000
0.2691
0.0000
0.0000
228152000
gduggal-bwavardINDELD6_15*homalt
78.7719
65.1755
99.5366
41.1089
4123220340811914
73.6842
gduggal-bwavardSNPti**
99.3434
99.0343
99.6545
21.4644
206537920139205725571332188
30.6743
gduggal-bwavardSNPti*het
99.2556
99.0550
99.4571
24.6552
126978312114126578969102002
28.9725
gduggal-bwavardSNPti*hetalt
0.0000
1.0309
0.0000
0.0000
6576000
gduggal-bwavardSNPti*homalt
99.5201
99.0724
99.9718
15.7269
7955907449791466223186
83.4081
gduggal-snapfbINDELD16_PLUS**
0.1179
0.0590
100.0000
0.0000
46780100
gduggal-snapfbINDELD16_PLUS*het
0.1898
0.0950
100.0000
0.0000
33156100
gduggal-snapfbINDELD16_PLUS*hetalt
0.0000
0.0517
0.0000
0.0000
11932000
gduggal-snapfbINDELD16_PLUS*homalt
0.0000
0.0000
0.0000
01692000
gduggal-snapfbINDELC6_15**
71.8894
85.7143
61.9048
96.2298
611385
62.5000
gduggal-snapfbINDELC6_15*het
75.0000
85.7143
66.6667
94.0945
611053
60.0000
gduggal-snapfbINDELC6_15*hetalt
0.0000
0.0000
50.0000
98.0000
00222
100.0000
gduggal-snapfbINDELC6_15*homalt
0.0000
0.0000
50.0000
98.0583
00110
0.0000
gduggal-bwavardSNP***
99.3249
99.0431
99.6083
22.9016
3025405292293004827118173477
29.4237
gduggal-bwavardSNP**het
99.2301
99.0784
99.3822
26.2938
1856334172671845056114693208
27.9711
gduggal-bwavardSNP**hetalt
0.0000
0.6889
0.0000
0.0000
6865000
gduggal-bwavardSNP**homalt
99.5128
99.0597
99.9700
16.7717
1169065110971159771348269
77.2989
gduggal-snapfbINDELC16_PLUS**
0.0000
0.0000
0.0000
00000
gduggal-snapfbINDELC16_PLUS*het
0.0000
0.0000
0.0000
00000
gduggal-snapfbINDELC16_PLUS*hetalt
0.0000
0.0000
0.0000
00000
gduggal-snapfbINDELC16_PLUS*homalt
0.0000
0.0000
0.0000
00000
gduggal-snapfbINDELC1_5**
35.4772
90.0000
22.0930
85.2234
9119676
8.9552
gduggal-snapfbINDELC1_5*het
41.5584
88.8889
27.1186
82.3353
8116433
6.9767
gduggal-snapfbINDELC1_5*hetalt
22.2222
100.0000
12.5000
85.4545
10172
28.5714
gduggal-snapfbINDELC1_5*homalt
0.0000
0.0000
10.5263
90.1554
002171
5.8824
gduggal-bwavardSNPtv**
99.2324
99.0032
99.4627
26.1679
960032966695530951611540
29.8392
gduggal-bwavardSNPtv*het
99.1377
99.1291
99.1462
30.0519
586551515358408950301454
28.9066
gduggal-bwavardSNPtv*hetalt
0.0000
0.6889
0.0000
0.0000
6865000
gduggal-bwavardSNPtv*homalt
99.4965
99.0327
99.9647
19.0358
373475364837122013186
65.6489
gduggal-snapfbINDEL***
92.2602
90.5733
94.0112
57.2799
31206332479322983205759778
47.5237
gduggal-snapfbINDEL**het
92.8434
92.0858
93.6136
55.1298
17876915364200114136525023
36.7931