PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubset GenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
1001-1050 / 86044 show all
ghariani-varprowlINDELC6_15**
0.0000
100.0000
0.0000
0.0000
70000
ghariani-varprowlINDELC6_15*het
0.0000
100.0000
0.0000
0.0000
70000
ghariani-varprowlINDELC6_15*hetalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC6_15*homalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELD16_PLUS**
61.7015
59.1244
64.5135
70.3568
40112773402522142123
95.8898
ghariani-varprowlINDELD16_PLUS*het
72.5780
95.3150
58.5993
70.3918
3011148302921402055
96.0280
ghariani-varprowlINDELD16_PLUS*hetalt
0.0000
0.2587
0.0000
0.0000
51928000
ghariani-varprowlINDELD16_PLUS*homalt
72.0773
58.8061
93.0841
70.1867
9956979967468
91.8919
ghariani-varprowlINDELD1_5**
89.8931
89.1478
90.6510
61.1738
130819159251306781347711237
83.3791
ghariani-varprowlINDELD1_5*het
92.9952
99.3560
87.3999
64.6847
87009564869831254010606
84.5774
ghariani-varprowlINDELD1_5*hetalt
0.0000
0.5661
0.0000
0.0000
5810187000
ghariani-varprowlINDELD1_5*homalt
93.4710
89.4248
97.9006
50.1151
43752517443695937631
67.3426
ghariani-varprowlINDELD6_15**
61.5999
58.5275
65.0128
56.9372
15271108211526582158072
98.2593
ghariani-varprowlINDELD6_15*het
73.5164
97.8175
58.8869
57.8444
113392531136479347830
98.6892
ghariani-varprowlINDELD6_15*hetalt
0.0000
0.3915
0.0000
0.0000
328142000
ghariani-varprowlINDELD6_15*homalt
74.2367
61.6503
93.2807
52.1893
390024263901281242
86.1210
ghariani-varprowlINDELI16_PLUS**
60.9624
54.8063
68.6764
63.4694
34952882349715951576
98.8088
ghariani-varprowlINDELI16_PLUS*het
73.3265
90.1398
61.7994
65.3970
2450268245915201502
98.8158
ghariani-varprowlINDELI16_PLUS*hetalt
0.0000
0.4766
0.0000
0.0000
102088000
ghariani-varprowlINDELI16_PLUS*homalt
77.5054
66.3037
93.2615
54.3852
103552610387574
98.6667
ghariani-varprowlINDELI1_5**
89.9389
88.6296
91.2876
58.9415
133532171311334041273211050
86.7892
ghariani-varprowlINDELI1_5*het
92.7410
98.8133
87.3718
65.8570
78102938781201129110122
89.6466
ghariani-varprowlINDELI1_5*hetalt
0.0000
0.7861
0.0000
0.0000
8811107000
ghariani-varprowlINDELI1_5*homalt
94.4302
91.5834
97.4597
39.6857
553425086552841441928
64.3997
ghariani-varprowlINDELI6_15**
61.1674
55.3640
68.3299
52.2203
13743110801376363796287
98.5578
ghariani-varprowlINDELI6_15*het
73.9358
94.0397
60.9136
54.3281
9435598949460926035
99.0643
ghariani-varprowlINDELI6_15*hetalt
0.0000
0.5029
0.0000
0.0000
438508000
ghariani-varprowlINDELI6_15*homalt
79.0493
68.3603
93.7006
43.2628
426519744269287252
87.8049
ghariani-varprowlSNP***
99.3496
99.8685
98.8361
25.2137
305057740163051086359302639
7.3448
ghariani-varprowlSNP**het
99.0974
99.8581
98.3482
28.2380
18709072659187129431430431
1.3713
ghariani-varprowlSNP**hetalt
0.0000
0.0000
0.0000
0871000
ghariani-varprowlSNP**homalt
99.7891
99.9588
99.6200
19.7823
1179670486117979245002208
49.0667
ghariani-varprowlSNPti**
99.5372
99.8784
99.1982
22.5770
208295725362083186168371291
7.6676
ghariani-varprowlSNPti*het
99.3626
99.8721
98.8582
25.2183
12802371639128041714789277
1.8730
ghariani-varprowlSNPti*hetalt
0.0000
0.0000
0.0000
0582000
ghariani-varprowlSNPti*homalt
99.8530
99.9608
99.7455
17.9110
80272031580276920481014
49.5117
ghariani-varprowlSNPtv**
98.9190
99.7874
98.0655
30.2667
9676202062967900190931348
7.0602
ghariani-varprowlSNPtv*het
98.5275
99.8276
97.2608
33.9264
590670102059087716641154
0.9254
ghariani-varprowlSNPtv*hetalt
0.0000
0.0000
0.0000
0871000
ghariani-varprowlSNPtv*homalt
99.6533
99.9547
99.3538
23.4817
37695017137702324521194
48.6949
hfeng-pmm1INDEL***
99.3397
99.0289
99.6526
57.3618
34119633463410571189887
74.6005
hfeng-pmm1INDEL**het
99.4245
99.1923
99.6578
58.3471
1925651568192194660374
56.6667
hfeng-pmm1INDEL**hetalt
96.9096
94.0524
99.9458
58.8135
237361501239601312
92.3077
hfeng-pmm1INDEL**homalt
99.6836
99.7787
99.5886
55.4406
124895277124903516501
97.0930
hfeng-pmm1INDELC16_PLUS**
0.0000
0.0000
0.0000
00000
hfeng-pmm1INDELC16_PLUS*het
0.0000
0.0000
0.0000
00000
hfeng-pmm1INDELC16_PLUS*hetalt
0.0000
0.0000
0.0000
00000
hfeng-pmm1INDELC16_PLUS*homalt
0.0000
0.0000
0.0000
00000
hfeng-pmm1INDELC1_5**
0.0000
90.0000
0.0000
0.0000
91000
hfeng-pmm1INDELC1_5*het
0.0000
88.8889
0.0000
0.0000
81000