PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TP Query FPFP gt% FP ma
85901-85950 / 86044 show all
gduggal-bwavardINDELD1_5map_l150_m2_e0hetalt
0.0000
14.2857
0.0000
0.0000
16000
gduggal-bwavardINDELD1_5map_l150_m2_e1hetalt
0.0000
12.5000
0.0000
0.0000
17000
gduggal-bwavardINDELD1_5map_l250_m0_e0hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDELD1_5map_l250_m1_e0hetalt
0.0000
33.3333
0.0000
0.0000
12000
gduggal-bwavardINDELD1_5map_l250_m2_e0hetalt
0.0000
33.3333
0.0000
0.0000
12000
gduggal-bwavardINDELD1_5map_l250_m2_e1hetalt
0.0000
33.3333
0.0000
0.0000
12000
gduggal-bwavardINDELD1_5map_sirenhetalt
0.0000
1.1905
0.0000
0.0000
183000
gduggal-bwavardINDELD1_5segduphetalt
0.0000
1.9231
0.0000
0.0000
151000
gduggal-bwavardINDELD1_5segdupwithalthetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDELD1_5segdupwithalthomalt
0.0000
100.0000
00000
gduggal-bwavardINDELD1_5tech_badpromotershetalt
0.0000
0.0000
0.0000
02000
gduggal-bwavardINDELD6_15*hetalt
0.0000
0.2691
0.0000
0.0000
228152000
gduggal-bwavardINDELD6_15HG002complexvarhetalt
0.0000
2.1718
0.0000
0.0000
22991000
gduggal-bwavardINDELD6_15HG002compoundhethetalt
0.0000
0.2576
0.0000
0.0000
218130000
gduggal-bwavardINDELD6_15decoy*
0.0000
0.0000
99.8955
01021
50.0000
gduggal-bwavardINDELD6_15decoyhet
0.0000
0.0000
99.8893
00021
50.0000
gduggal-bwavardINDELD6_15decoyhetalt
0.0000
0.0000
0.0000
01000
gduggal-bwavardINDELD6_15decoyhomalt
0.0000
100.0000
00000
gduggal-bwavardINDELD6_15func_cdshetalt
0.0000
0.0000
0.0000
02000
gduggal-bwavardINDELD6_15lowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
0.0423
0.0000
0.0000
12365000
gduggal-bwavardINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
02000
gduggal-bwavardINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
01000
gduggal-bwavardINDELD6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
0.3230
0.0000
0.0000
226790000
gduggal-bwavardINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
0.0000
0.2482
0.0000
0.0000
208039000
gduggal-bwavardINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
039000
gduggal-bwavardINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
02000
gduggal-bwavardINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
gduggal-bwavardINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
055000
gduggal-bwavardINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
033000
gduggal-bwavardINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
0.0585
0.0000
0.0000
11707000
gduggal-bwavardINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
01000
gduggal-bwavardINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
0.0000
0.2109
0.0000
0.0000
157097000
gduggal-bwavardINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
0.0000
0.2574
0.0000
0.0000
145424000
gduggal-bwavardINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
0.0000
0.2091
0.0000
0.0000
157159000
gduggal-bwavardINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
0.0000
0.2482
0.0000
0.0000
208039000
gduggal-bwavardINDELD6_15lowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
0.3772
0.0000
0.0000
184754000
gduggal-bwavardINDELD6_15lowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
0.0000
0.0000
0872000
gduggal-bwavardINDELD6_15lowcmp_SimpleRepeat_diTR_gt200*
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDELD6_15lowcmp_SimpleRepeat_diTR_gt200het
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDELD6_15lowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDELD6_15lowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDELD6_15lowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
0.0000
0.0000
037000
gduggal-bwavardINDELD6_15lowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
0.0000
0.0000
09000
gduggal-bwavardINDELD6_15lowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
0.2538
0.0000
0.0000
31179000
gduggal-bwavardINDELD6_15lowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.0000
0.0000
0793000
gduggal-bwavardINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000