PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TP Query FPFP gt% FP ma
651-700 / 86044 show all
anovak-vgINDELD1_5map_l150_m0_e0hetalt
0.0000
100.0000
0.0000
0.0000
20000
anovak-vgINDELD1_5map_l150_m1_e0hetalt
0.0000
42.8571
0.0000
0.0000
34000
anovak-vgINDELD1_5map_l150_m2_e0hetalt
0.0000
42.8571
0.0000
0.0000
34000
anovak-vgINDELD1_5map_l150_m2_e1hetalt
0.0000
37.5000
0.0000
0.0000
35000
anovak-vgINDELD1_5map_l250_m0_e0hetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELD1_5map_l250_m1_e0hetalt
0.0000
66.6667
0.0000
0.0000
21000
anovak-vgINDELD1_5map_l250_m2_e0hetalt
0.0000
66.6667
0.0000
0.0000
21000
anovak-vgINDELD1_5map_l250_m2_e1hetalt
0.0000
66.6667
0.0000
0.0000
21000
anovak-vgINDELD1_5map_sirenhetalt
0.0000
32.1429
0.0000
0.0000
2757000
anovak-vgINDELD1_5segduphetalt
0.0000
17.3077
0.0000
0.0000
943000
anovak-vgINDELD1_5segdupwithalthetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELD1_5segdupwithalthomalt
0.0000
100.0000
00000
anovak-vgINDELD1_5tech_badpromotershetalt
0.0000
0.0000
0.0000
02000
anovak-vgINDELD6_15*hetalt
0.0000
24.6269
0.0000
0.0000
20136161000
anovak-vgINDELD6_15HG002complexvarhetalt
0.0000
25.8638
0.0000
0.0000
262751000
anovak-vgINDELD6_15HG002compoundhethetalt
0.0000
24.5859
0.0000
0.0000
20046147000
anovak-vgINDELD6_15decoy*
0.0000
0.0000
99.9147
01010
0.0000
anovak-vgINDELD6_15decoyhet
0.0000
0.0000
99.8978
00010
0.0000
anovak-vgINDELD6_15decoyhetalt
0.0000
0.0000
0.0000
01000
anovak-vgINDELD6_15decoyhomalt
0.0000
100.0000
00000
anovak-vgINDELD6_15func_cdshetalt
0.0000
0.0000
0.0000
02000
anovak-vgINDELD6_15lowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
14.1589
0.0000
0.0000
3352031000
anovak-vgINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
02000
anovak-vgINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
01000
anovak-vgINDELD6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
27.2460
0.0000
0.0000
18564956000
anovak-vgINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
0.0000
24.4075
0.0000
0.0000
19676092000
anovak-vgINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
20.5128
0.0000
0.0000
831000
anovak-vgINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
02000
anovak-vgINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
anovak-vgINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
0.0000
29.0909
0.0000
0.0000
1639000
anovak-vgINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
0.0000
33.3333
0.0000
0.0000
1122000
anovak-vgINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
14.0515
0.0000
0.0000
2401468000
anovak-vgINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
50.0000
100.0000
11000
anovak-vgINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
100.0000
100.0000
10000
anovak-vgINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
01000
anovak-vgINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
0.0000
24.0720
0.0000
0.0000
17125400000
anovak-vgINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
0.0000
27.1056
0.0000
0.0000
14743964000
anovak-vgINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
0.0000
24.0312
0.0000
0.0000
17245450000
anovak-vgINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
0.0000
24.4075
0.0000
0.0000
19676092000
anovak-vgINDELD6_15lowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
25.3353
0.0000
0.0000
12093563000
anovak-vgINDELD6_15lowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
7.4541
0.0000
0.0000
65807000
anovak-vgINDELD6_15lowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
21.6216
0.0000
0.0000
829000
anovak-vgINDELD6_15lowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
11.1111
0.0000
0.0000
18000
anovak-vgINDELD6_15lowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
31.9797
0.0000
0.0000
378804000
anovak-vgINDELD6_15lowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
16.1412
0.0000
0.0000
128665000
anovak-vgINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
0.0000
0.0000
00000
anovak-vgINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
anovak-vgINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000