PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FP FP gt% FP ma
1401-1450 / 86044 show all
raldana-dualsentieonSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
94.1176
10100
raldana-dualsentieonSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
93.3333
10100
raldana-dualsentieonSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
91.6667
20200
raldana-dualsentieonSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
100.0000
100.0000
100.0000
81.2500
1201200
raldana-dualsentieonSNPtilowcmp_SimpleRepeat_diTR_11to50hetalt
100.0000
100.0000
100.0000
94.1176
10100
raldana-dualsentieonSNPtilowcmp_SimpleRepeat_diTR_51to200*
89.6552
81.2500
100.0000
97.7816
1331300
raldana-dualsentieonSNPtilowcmp_SimpleRepeat_diTR_51to200het
82.3529
70.0000
100.0000
98.2544
73700
raldana-dualsentieonSNPtilowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
100.0000
00000
raldana-dualsentieonSNPtilowcmp_SimpleRepeat_diTR_51to200homalt
100.0000
100.0000
100.0000
96.7391
60600
raldana-dualsentieonSNPtilowcmp_SimpleRepeat_homopolymer_6to10hetalt
100.0000
100.0000
100.0000
77.7778
20200
raldana-dualsentieonSNPtilowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
100.0000
00000
raldana-dualsentieonSNPtilowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
raldana-dualsentieonSNPtilowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
100.0000
00000
raldana-dualsentieonSNPtilowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
raldana-dualsentieonSNPtilowcmp_SimpleRepeat_quadTR_11to50hetalt
100.0000
100.0000
100.0000
83.3333
10100
raldana-dualsentieonSNPtilowcmp_SimpleRepeat_quadTR_51to200*
90.2174
82.1782
100.0000
93.4543
83188300
raldana-dualsentieonSNPtilowcmp_SimpleRepeat_quadTR_51to200het
86.2069
75.7576
100.0000
94.2661
50165000
raldana-dualsentieonSNPtilowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.0000
0.0000
00000
raldana-dualsentieonSNPtilowcmp_SimpleRepeat_quadTR_51to200homalt
97.0588
94.2857
100.0000
91.6667
3323300
raldana-dualsentieonSNPtilowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
raldana-dualsentieonSNPtilowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
raldana-dualsentieonSNPtilowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
raldana-dualsentieonSNPtilowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
raldana-dualsentieonSNPtilowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
100.0000
01000
raldana-dualsentieonSNPtilowcmp_SimpleRepeat_triTR_51to200*
93.3333
87.5000
100.0000
94.4882
71700
raldana-dualsentieonSNPtilowcmp_SimpleRepeat_triTR_51to200het
90.9091
83.3333
100.0000
94.1860
51500
raldana-dualsentieonSNPtilowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
00000
raldana-dualsentieonSNPtilowcmp_SimpleRepeat_triTR_51to200homalt
100.0000
100.0000
100.0000
95.1220
20200
raldana-dualsentieonSNPtimap_l125_m0_e0hetalt
100.0000
100.0000
100.0000
69.2308
80800
raldana-dualsentieonSNPtimap_l125_m1_e0hetalt
100.0000
100.0000
100.0000
58.6207
2402400
raldana-dualsentieonSNPtimap_l125_m2_e0hetalt
100.0000
100.0000
100.0000
65.2174
2402400
raldana-dualsentieonSNPtimap_l125_m2_e1hetalt
100.0000
100.0000
100.0000
65.7143
2402400
raldana-dualsentieonSNPtimap_l150_m0_e0hetalt
100.0000
100.0000
100.0000
83.3333
30300
raldana-dualsentieonSNPtimap_l150_m1_e0hetalt
100.0000
100.0000
100.0000
66.6667
1501500
raldana-dualsentieonSNPtimap_l150_m2_e0hetalt
100.0000
100.0000
100.0000
70.5882
1501500
raldana-dualsentieonSNPtimap_l150_m2_e1hetalt
100.0000
100.0000
100.0000
71.1538
1501500
raldana-dualsentieonSNPtimap_l250_m0_e0hetalt
0.0000
100.0000
00000
raldana-dualsentieonSNPtimap_l250_m1_e0hetalt
100.0000
100.0000
100.0000
80.9524
40400
raldana-dualsentieonSNPtimap_l250_m2_e0hetalt
100.0000
100.0000
100.0000
78.2609
50500
raldana-dualsentieonSNPtimap_l250_m2_e1hetalt
100.0000
100.0000
100.0000
79.1667
50500
raldana-dualsentieonSNPtisegduphetalt
100.0000
100.0000
100.0000
98.3333
20200
raldana-dualsentieonSNPtisegdupwithalt*
0.0000
100.0000
00000
raldana-dualsentieonSNPtisegdupwithalthet
0.0000
100.0000
00000
raldana-dualsentieonSNPtisegdupwithalthetalt
0.0000
100.0000
00000
raldana-dualsentieonSNPtisegdupwithalthomalt
0.0000
100.0000
00000
raldana-dualsentieonSNPtitech_badpromotershet
97.6744
95.4545
100.0000
44.7368
4224200
raldana-dualsentieonSNPtitech_badpromotershetalt
0.0000
0.0000
0.0000
00000
raldana-dualsentieonSNPtvHG002complexvarhetalt
99.5138
99.0323
100.0000
35.3684
307330700
raldana-dualsentieonSNPtvHG002compoundhethetalt
99.7674
99.5360
100.0000
22.0708
858485800
raldana-dualsentieonSNPtvdecoy*
0.0000
100.0000
00000