PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt

« 1 2 ... 28 29 30 31 32 33 34 35 36 ... 1720 1721 » 1551-1600 / 86044 show all
raldana-dualsentieon	INDEL	C6_15	map_l250_m2_e1	*		0.0000	0.0000	0.0000	0	0	0	0	0
raldana-dualsentieon	INDEL	C6_15	map_l250_m2_e1	het		0.0000	0.0000	0.0000	0	0	0	0	0
raldana-dualsentieon	INDEL	C6_15	map_l250_m2_e1	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
raldana-dualsentieon	INDEL	C6_15	map_l250_m2_e1	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
raldana-dualsentieon	INDEL	C6_15	map_siren	*		0.0000	0.0000	0.0000	0	0	0	0	0
raldana-dualsentieon	INDEL	C6_15	map_siren	het		0.0000	0.0000	0.0000	0	0	0	0	0
raldana-dualsentieon	INDEL	C6_15	map_siren	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
raldana-dualsentieon	INDEL	C6_15	map_siren	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
raldana-dualsentieon	INDEL	C6_15	segdup	*		0.0000	0.0000	0.0000	0	0	0	0	0
raldana-dualsentieon	INDEL	C6_15	segdup	het		0.0000	0.0000	0.0000	0	0	0	0	0
raldana-dualsentieon	INDEL	C6_15	segdup	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
raldana-dualsentieon	INDEL	C6_15	segdup	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
raldana-dualsentieon	INDEL	C6_15	segdupwithalt	*		0.0000	0.0000	0.0000	0	0	0	0	0
raldana-dualsentieon	INDEL	C6_15	segdupwithalt	het		0.0000	0.0000	0.0000	0	0	0	0	0
raldana-dualsentieon	INDEL	C6_15	segdupwithalt	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
raldana-dualsentieon	INDEL	C6_15	segdupwithalt	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
raldana-dualsentieon	INDEL	C6_15	tech_badpromoters	*		0.0000	0.0000	0.0000	0	0	0	0	0
raldana-dualsentieon	INDEL	C6_15	tech_badpromoters	het		0.0000	0.0000	0.0000	0	0	0	0	0
raldana-dualsentieon	INDEL	C6_15	tech_badpromoters	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
raldana-dualsentieon	INDEL	C6_15	tech_badpromoters	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
raldana-dualsentieon	INDEL	D16_PLUS	HG002compoundhet	hetalt	96.3719	92.9979	100.0000	26.0481	1793	135	1905	0	0
raldana-dualsentieon	INDEL	D16_PLUS	decoy	*	100.0000	100.0000	100.0000	98.9565	6	0	6	0	0
raldana-dualsentieon	INDEL	D16_PLUS	decoy	het	100.0000	100.0000	100.0000	98.9873	4	0	4	0	0
raldana-dualsentieon	INDEL	D16_PLUS	decoy	hetalt		0.0000		100.0000	0	0	0	0	0
raldana-dualsentieon	INDEL	D16_PLUS	decoy	homalt	100.0000	100.0000	100.0000	98.6486	2	0	2	0	0
raldana-dualsentieon	INDEL	D16_PLUS	func_cds	*	95.6522	91.6667	100.0000	74.4186	11	1	11	0	0
raldana-dualsentieon	INDEL	D16_PLUS	func_cds	het	93.3333	87.5000	100.0000	77.4194	7	1	7	0	0
raldana-dualsentieon	INDEL	D16_PLUS	func_cds	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
raldana-dualsentieon	INDEL	D16_PLUS	func_cds	homalt	100.0000	100.0000	100.0000	66.6667	4	0	4	0	0
raldana-dualsentieon	INDEL	D16_PLUS	lowcmp_AllRepeats_gt200bp_gt95identity_merged	het	100.0000	100.0000	100.0000	99.7361	1	0	1	0	0
raldana-dualsentieon	INDEL	D16_PLUS	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	91.6667	1	0	1	0	0
raldana-dualsentieon	INDEL	D16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	97.7075	95.5178	100.0000	35.7483	1236	58	1348	0	0
raldana-dualsentieon	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	hetalt	95.2381	90.9091	100.0000	83.5443	10	1	13	0	0
raldana-dualsentieon	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	het	100.0000	100.0000	100.0000	99.7283	1	0	1	0	0
raldana-dualsentieon	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	90.0000	1	0	1	0	0
raldana-dualsentieon	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	71.6049	19	0	23	0	0
raldana-dualsentieon	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	46.1538	12	0	14	0	0
raldana-dualsentieon	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	homalt	100.0000	100.0000	100.0000	46.9849	211	0	211	0	0
raldana-dualsentieon	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
raldana-dualsentieon	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
raldana-dualsentieon	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	hetalt		0.0000		100.0000	0	0	0	0	0
raldana-dualsentieon	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
raldana-dualsentieon	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	97.6139	95.3390	100.0000	30.9052	900	44	977	0	0
raldana-dualsentieon	INDEL	D16_PLUS	lowcmp_SimpleRepeat_diTR_11to50	hetalt	97.7169	95.5357	100.0000	32.6547	749	35	827	0	0
raldana-dualsentieon	INDEL	D16_PLUS	lowcmp_SimpleRepeat_diTR_51to200	hetalt	91.2020	83.8269	100.0000	33.9650	368	71	453	0	0
raldana-dualsentieon	INDEL	D16_PLUS	lowcmp_SimpleRepeat_diTR_gt200	*		0.0000	0.0000	0.0000	0	0	0	0	0
raldana-dualsentieon	INDEL	D16_PLUS	lowcmp_SimpleRepeat_diTR_gt200	het		0.0000	0.0000	0.0000	0	0	0	0	0
raldana-dualsentieon	INDEL	D16_PLUS	lowcmp_SimpleRepeat_diTR_gt200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
raldana-dualsentieon	INDEL	D16_PLUS	lowcmp_SimpleRepeat_diTR_gt200	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
raldana-dualsentieon	INDEL	D16_PLUS	lowcmp_SimpleRepeat_homopolymer_6to10	hetalt	100.0000	100.0000	100.0000	54.2857	12	0	16	0	0

PrecisionFDA Truth Challenge

PrecisionFDA
Truth Challenge