PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecall PrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
1051-1100 / 86044 show all
raldana-dualsentieonINDELD1_5lowcmp_SimpleRepeat_triTR_11to50homalt
100.0000
100.0000
100.0000
40.5454
13300133000
raldana-dualsentieonINDELD1_5lowcmp_SimpleRepeat_triTR_51to200homalt
92.8571
100.0000
86.6667
57.1429
1301322
100.0000
raldana-dualsentieonINDELD1_5map_l125_m0_e0hetalt
100.0000
100.0000
100.0000
97.0588
30300
raldana-dualsentieonINDELD1_5map_l150_m0_e0hetalt
100.0000
100.0000
100.0000
97.4359
20200
mlin-fermikitINDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10homalt
100.0000
100.0000
100.0000
90.0000
40400
mlin-fermikitINDELI16_PLUSlowcmp_SimpleRepeat_triTR_11to50homalt
100.0000
100.0000
100.0000
78.3784
80800
mlin-fermikitINDELI16_PLUSmap_l150_m0_e0homalt
66.6667
100.0000
50.0000
81.8182
10110
0.0000
mlin-fermikitINDELI16_PLUSmap_l250_m1_e0*
66.6667
100.0000
50.0000
90.4762
10110
0.0000
mlin-fermikitINDELI16_PLUSmap_l250_m1_e0het
100.0000
100.0000
100.0000
94.1176
10100
mlin-fermikitINDELI16_PLUSmap_l250_m2_e0*
66.6667
100.0000
50.0000
92.3077
10110
0.0000
mlin-fermikitINDELI16_PLUSmap_l250_m2_e0het
100.0000
100.0000
100.0000
94.4444
10100
mlin-fermikitINDELI16_PLUSmap_l250_m2_e1*
66.6667
100.0000
50.0000
92.5926
10110
0.0000
mlin-fermikitINDELI16_PLUSmap_l250_m2_e1het
100.0000
100.0000
100.0000
94.7368
10100
mlin-fermikitINDELI16_PLUSsegduphomalt
100.0000
100.0000
100.0000
92.3372
1902000
mlin-fermikitINDELI16_PLUStech_badpromoters*
100.0000
100.0000
100.0000
66.6667
40400
mlin-fermikitINDELI16_PLUStech_badpromotershet
100.0000
100.0000
100.0000
60.0000
20200
mlin-fermikitINDELI16_PLUStech_badpromotershomalt
100.0000
100.0000
100.0000
66.6667
20200
mlin-fermikitINDELI1_5func_cdshetalt
100.0000
100.0000
100.0000
33.3333
20200
mlin-fermikitINDELI1_5func_cdshomalt
99.5816
100.0000
99.1667
24.5283
119011911
100.0000
mlin-fermikitINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
99.9024
10100
mlin-fermikitINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
97.7778
10100
mlin-fermikitINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
99.8999
10100
mlin-fermikitINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
97.5000
10100
mlin-fermikitINDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10*
100.0000
100.0000
100.0000
99.9900
10100
mlin-fermikitINDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.9760
10100
mlin-fermikitINDELI1_5lowcmp_SimpleRepeat_quadTR_51to200homalt
16.6667
100.0000
9.0909
90.8333
101109
90.0000
mlin-fermikitINDELI1_5tech_badpromoters*
100.0000
100.0000
100.0000
43.5897
2202200
mlin-fermikitINDELI1_5tech_badpromotershet
100.0000
100.0000
100.0000
38.4615
80800
mlin-fermikitINDELI1_5tech_badpromotershetalt
100.0000
100.0000
100.0000
0.0000
10100
mlin-fermikitINDELI1_5tech_badpromotershomalt
100.0000
100.0000
100.0000
48.0000
1301300
mlin-fermikitINDELI6_15func_cdshet
97.9592
100.0000
96.0000
37.5000
2402411
100.0000
mlin-fermikitINDELI6_15func_cdshomalt
100.0000
100.0000
100.0000
40.0000
1501500
mlin-fermikitINDELI6_15lowcmp_SimpleRepeat_triTR_51to200het
0.0000
100.0000
0.0000
84.6154
10022
100.0000
mlin-fermikitINDELI6_15tech_badpromotershomalt
100.0000
100.0000
100.0000
57.1429
30300
mlin-fermikitSNP*func_cdshetalt
100.0000
100.0000
100.0000
37.5000
1001000
mlin-fermikitSNP*lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
76.7857
1301300
mlin-fermikitSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
80.0000
10100
mlin-fermikitSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
75.0000
10100
mlin-fermikitSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
84.6154
20200
mlin-fermikitSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
81.8182
20200
mlin-fermikitSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
91.4286
30300
mlin-fermikitSNP*lowcmp_SimpleRepeat_diTR_11to50hetalt
100.0000
100.0000
100.0000
94.1176
10100
mlin-fermikitSNP*lowcmp_SimpleRepeat_homopolymer_6to10hetalt
100.0000
100.0000
100.0000
68.7500
50500
mlin-fermikitSNP*lowcmp_SimpleRepeat_quadTR_11to50hetalt
100.0000
100.0000
100.0000
50.0000
50500
mlin-fermikitSNP*lowcmp_SimpleRepeat_triTR_11to50hetalt
100.0000
100.0000
100.0000
66.6667
10100
mlin-fermikitSNP*lowcmp_SimpleRepeat_triTR_51to200het
93.3333
100.0000
87.5000
95.2381
70710
0.0000
mlin-fermikitSNP*segduphetalt
100.0000
100.0000
100.0000
92.8571
70700
mlin-fermikitSNPtifunc_cdshetalt
100.0000
100.0000
100.0000
38.4615
80800
mlin-fermikitSNPtilowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
79.3103
60600
mlin-fermikitSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
50.0000
10100