PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-score RecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
84401-84450 / 86044 show all
jmaeng-gatkINDELI16_PLUStech_badpromoters*
100.0000
100.0000
100.0000
71.4286
40400
jmaeng-gatkINDELI16_PLUStech_badpromotershet
100.0000
100.0000
100.0000
71.4286
20200
jmaeng-gatkINDELI16_PLUStech_badpromotershomalt
100.0000
100.0000
100.0000
66.6667
20200
jmaeng-gatkINDELI1_5func_cdshetalt
100.0000
100.0000
100.0000
0.0000
20200
jmaeng-gatkINDELI1_5func_cdshomalt
100.0000
100.0000
100.0000
31.2139
119011900
jmaeng-gatkINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
99.8605
10100
jmaeng-gatkINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
96.2963
10100
jmaeng-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
99.8559
10100
jmaeng-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
95.8333
10100
jmaeng-gatkINDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10*
100.0000
100.0000
100.0000
99.9933
10100
jmaeng-gatkINDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.9837
10100
jmaeng-gatkINDELI1_5map_l100_m0_e0hetalt
100.0000
100.0000
100.0000
93.5252
90900
jmaeng-gatkINDELI1_5map_l125_m0_e0hetalt
100.0000
100.0000
100.0000
96.0784
40400
jmaeng-gatkINDELI1_5map_l125_m1_e0hetalt
100.0000
100.0000
100.0000
93.3071
1701700
jmaeng-gatkINDELI1_5map_l125_m2_e0hetalt
100.0000
100.0000
100.0000
93.4483
1901900
jmaeng-gatkINDELI1_5map_l125_m2_e1hetalt
100.0000
100.0000
100.0000
93.5593
1901900
jmaeng-gatkINDELI1_5map_l150_m0_e0hetalt
100.0000
100.0000
100.0000
96.0000
30300
jmaeng-gatkINDELI1_5map_l150_m1_e0hetalt
100.0000
100.0000
100.0000
95.3125
90900
jmaeng-gatkINDELI1_5map_l150_m2_e0hetalt
100.0000
100.0000
100.0000
95.9821
90900
jmaeng-gatkINDELI1_5map_l150_m2_e1hetalt
100.0000
100.0000
100.0000
95.6332
1001000
jmaeng-gatkINDELI1_5map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
98.0392
20200
jmaeng-gatkINDELI1_5map_l250_m2_e0hetalt
100.0000
100.0000
100.0000
98.4127
20200
jmaeng-gatkINDELI1_5map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
98.4375
20200
jmaeng-gatkINDELI1_5tech_badpromoters*
100.0000
100.0000
100.0000
53.1915
2202200
jmaeng-gatkINDELI1_5tech_badpromotershet
100.0000
100.0000
100.0000
42.8571
80800
jmaeng-gatkINDELI1_5tech_badpromotershetalt
100.0000
100.0000
100.0000
50.0000
10100
jmaeng-gatkINDELI1_5tech_badpromotershomalt
100.0000
100.0000
100.0000
58.0645
1301300
jmaeng-gatkINDELI6_15func_cdshomalt
100.0000
100.0000
100.0000
42.3077
1501500
jmaeng-gatkINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
70.8155
6806800
jmaeng-gatkINDELI6_15lowcmp_SimpleRepeat_homopolymer_6to10homalt
100.0000
100.0000
100.0000
81.5094
4904900
jmaeng-gatkINDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10*
100.0000
100.0000
100.0000
99.8691
20200
jmaeng-gatkINDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.3691
20200
jmaeng-gatkINDELI6_15lowcmp_SimpleRepeat_triTR_11to50homalt
100.0000
100.0000
100.0000
64.2424
5905900
jmaeng-gatkINDELI6_15map_l150_m1_e0hetalt
100.0000
100.0000
100.0000
92.8571
30300
jmaeng-gatkINDELI6_15map_l150_m2_e0hetalt
100.0000
100.0000
100.0000
93.7500
30300
jmaeng-gatkINDELI6_15map_l150_m2_e1hetalt
100.0000
100.0000
100.0000
94.0000
30300
jmaeng-gatkINDELI6_15segduphomalt
100.0000
100.0000
100.0000
92.7914
4704700
jmaeng-gatkINDELI6_15tech_badpromoters*
100.0000
100.0000
100.0000
56.6667
1301300
jmaeng-gatkINDELI6_15tech_badpromotershet
100.0000
100.0000
100.0000
56.2500
70700
jmaeng-gatkINDELI6_15tech_badpromotershetalt
100.0000
100.0000
100.0000
50.0000
30300
jmaeng-gatkINDELI6_15tech_badpromotershomalt
100.0000
100.0000
100.0000
62.5000
30300
jmaeng-gatkSNP*func_cdshetalt
100.0000
100.0000
100.0000
64.2857
1001000
jmaeng-gatkSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
100.0000
100.0000
100.0000
94.1176
1501500
jmaeng-gatkSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
80.0000
10100
jmaeng-gatkSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
75.0000
10100
jmaeng-gatkSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
90.9091
20200
jmaeng-gatkSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
89.4737
20200
jmaeng-gatkSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
93.8776
30300
jmaeng-gatkSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
100.0000
100.0000
100.0000
94.1176
1501500
jmaeng-gatkSNP*lowcmp_SimpleRepeat_diTR_11to50hetalt
100.0000
100.0000
100.0000
95.8333
10100