PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-score RecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
84351-84400 / 86044 show all
jmaeng-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
92.0000
20200
jmaeng-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
92.8571
10100
jmaeng-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
75.0000
10100
jmaeng-gatkINDELD6_15lowcmp_SimpleRepeat_homopolymer_6to10homalt
100.0000
100.0000
100.0000
82.0388
7407400
jmaeng-gatkINDELD6_15lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.1758
90900
jmaeng-gatkINDELD6_15lowcmp_SimpleRepeat_triTR_51to200homalt
100.0000
100.0000
100.0000
40.0000
2102100
jmaeng-gatkINDELD6_15map_l125_m0_e0hetalt
100.0000
100.0000
100.0000
90.9091
60600
jmaeng-gatkINDELD6_15map_l125_m0_e0homalt
100.0000
100.0000
100.0000
92.8571
1201200
jmaeng-gatkINDELD6_15map_l150_m0_e0hetalt
100.0000
100.0000
100.0000
91.2281
50500
jmaeng-gatkINDELD6_15map_l150_m0_e0homalt
100.0000
100.0000
100.0000
94.7761
70700
jmaeng-gatkINDELD6_15map_l150_m1_e0hetalt
100.0000
100.0000
100.0000
91.7526
80800
jmaeng-gatkINDELD6_15map_l150_m2_e0hetalt
100.0000
100.0000
100.0000
92.6606
80800
jmaeng-gatkINDELD6_15map_l250_m0_e0*
100.0000
100.0000
100.0000
98.5612
60600
jmaeng-gatkINDELD6_15map_l250_m0_e0het
100.0000
100.0000
100.0000
98.7179
40400
jmaeng-gatkINDELD6_15map_l250_m0_e0homalt
100.0000
100.0000
100.0000
97.3684
20200
jmaeng-gatkINDELD6_15map_l250_m1_e0*
100.0000
100.0000
100.0000
97.6471
1801800
jmaeng-gatkINDELD6_15map_l250_m1_e0het
100.0000
100.0000
100.0000
98.0969
1101100
jmaeng-gatkINDELD6_15map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
96.3636
20200
jmaeng-gatkINDELD6_15map_l250_m1_e0homalt
100.0000
100.0000
100.0000
96.2121
50500
jmaeng-gatkINDELD6_15map_l250_m2_e0*
100.0000
100.0000
100.0000
97.5113
2202200
jmaeng-gatkINDELD6_15map_l250_m2_e0het
100.0000
100.0000
100.0000
97.8884
1401400
jmaeng-gatkINDELD6_15map_l250_m2_e0hetalt
100.0000
100.0000
100.0000
97.1429
20200
jmaeng-gatkINDELD6_15map_l250_m2_e0homalt
100.0000
100.0000
100.0000
96.0265
60600
jmaeng-gatkINDELD6_15map_l250_m2_e1*
100.0000
100.0000
100.0000
97.5798
2202200
jmaeng-gatkINDELD6_15map_l250_m2_e1het
100.0000
100.0000
100.0000
97.9532
1401400
jmaeng-gatkINDELD6_15map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
97.2222
20200
jmaeng-gatkINDELD6_15map_l250_m2_e1homalt
100.0000
100.0000
100.0000
96.0784
60600
jmaeng-gatkINDELD6_15tech_badpromoters*
100.0000
100.0000
100.0000
51.4286
1701700
jmaeng-gatkINDELD6_15tech_badpromotershet
100.0000
100.0000
100.0000
52.3810
1001000
jmaeng-gatkINDELD6_15tech_badpromotershetalt
100.0000
100.0000
100.0000
0.0000
10100
jmaeng-gatkINDELD6_15tech_badpromotershomalt
100.0000
100.0000
100.0000
53.8462
60600
jmaeng-gatkINDELI16_PLUSfunc_cdshet
100.0000
100.0000
100.0000
70.0000
90900
jmaeng-gatkINDELI16_PLUSfunc_cdshomalt
100.0000
100.0000
100.0000
88.2353
20200
jmaeng-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
75.5760
5305300
jmaeng-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
83.5052
1601600
jmaeng-gatkINDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10het
100.0000
100.0000
100.0000
88.5496
1501500
jmaeng-gatkINDELI16_PLUSlowcmp_SimpleRepeat_triTR_11to50hetalt
100.0000
100.0000
100.0000
67.5000
1301300
jmaeng-gatkINDELI16_PLUSlowcmp_SimpleRepeat_triTR_11to50homalt
100.0000
100.0000
100.0000
83.6735
80800
jmaeng-gatkINDELI16_PLUSlowcmp_SimpleRepeat_triTR_51to200hetalt
100.0000
100.0000
100.0000
60.0000
20200
jmaeng-gatkINDELI16_PLUSmap_l100_m0_e0hetalt
100.0000
100.0000
100.0000
91.6667
10100
jmaeng-gatkINDELI16_PLUSmap_l100_m0_e0homalt
100.0000
100.0000
100.0000
98.5915
20200
jmaeng-gatkINDELI16_PLUSmap_l125_m0_e0hetalt
100.0000
100.0000
100.0000
87.5000
10100
jmaeng-gatkINDELI16_PLUSmap_l125_m0_e0homalt
100.0000
100.0000
100.0000
98.4252
20200
jmaeng-gatkINDELI16_PLUSmap_l125_m1_e0homalt
100.0000
100.0000
100.0000
98.3333
30300
jmaeng-gatkINDELI16_PLUSmap_l150_m0_e0hetalt
100.0000
100.0000
100.0000
83.3333
10100
jmaeng-gatkINDELI16_PLUSmap_l150_m0_e0homalt
100.0000
100.0000
100.0000
99.0826
10100
jmaeng-gatkINDELI16_PLUSmap_l150_m1_e0homalt
100.0000
100.0000
100.0000
98.0645
30300
jmaeng-gatkINDELI16_PLUSmap_l150_m2_e0homalt
100.0000
100.0000
100.0000
98.2036
30300
jmaeng-gatkINDELI16_PLUSmap_l150_m2_e1homalt
100.0000
100.0000
100.0000
98.2036
30300
jmaeng-gatkINDELI16_PLUSsegduphetalt
100.0000
100.0000
100.0000
97.2028
40400