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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 3 4 5 6 7 ... 1720 1721 » 101-150 / 86044 show all
rpoplin-dv42	SNP	*	segdup	homalt	99.8140	99.8883	99.7398	89.1939	10731	12	10731	28	28	100.0000
rpoplin-dv42	SNP	*	map_siren	homalt	99.7831	99.6882	99.8783	53.6066	54984	172	54983	67	63	94.0299
rpoplin-dv42	SNP	*	map_l250_m2_e1	homalt	98.7018	97.9029	99.5138	87.8305	2661	57	2661	13	13	100.0000
rpoplin-dv42	SNP	*	map_l250_m2_e0	homalt	98.7237	97.9151	99.5458	87.7612	2630	56	2630	12	12	100.0000
rpoplin-dv42	SNP	*	map_l250_m1_e0	homalt	98.6481	97.7670	99.5453	86.6597	2408	55	2408	11	11	100.0000
rpoplin-dv42	SNP	*	map_l250_m0_e0	homalt	97.8208	96.3434	99.3443	91.6882	606	23	606	4	4	100.0000
rpoplin-dv42	SNP	*	map_l150_m2_e1	homalt	99.3508	98.9854	99.7189	73.6505	11707	120	11707	33	32	96.9697
rpoplin-dv42	SNP	*	map_l150_m2_e0	homalt	99.3437	98.9743	99.7158	73.6127	11579	120	11579	33	32	96.9697
rpoplin-dv42	SNP	*	map_l150_m1_e0	homalt	99.3277	98.9444	99.7139	71.2907	11154	119	11154	32	31	96.8750
rpoplin-dv42	SNP	*	map_l150_m0_e0	homalt	98.7551	97.9702	99.5527	75.0450	4006	83	4006	18	17	94.4444
rpoplin-dv42	SNP	*	map_l125_m2_e1	homalt	99.5110	99.2471	99.7764	69.2363	17400	132	17400	39	38	97.4359
rpoplin-dv42	SNP	*	map_l125_m2_e0	homalt	99.5066	99.2403	99.7743	69.1861	17243	132	17243	39	38	97.4359
rpoplin-dv42	SNP	*	map_l125_m1_e0	homalt	99.4988	99.2251	99.7740	66.6415	16774	131	16774	38	37	97.3684
rpoplin-dv42	SNP	*	map_l125_m0_e0	homalt	99.0933	98.5101	99.6834	69.3810	6612	100	6612	21	20	95.2381
rpoplin-dv42	SNP	*	map_l100_m2_e1	homalt	99.6343	99.4783	99.7907	63.6404	27651	145	27652	58	54	93.1034
rpoplin-dv42	SNP	*	map_l100_m2_e0	homalt	99.6325	99.4768	99.7886	63.6376	27379	144	27380	58	54	93.1034
rpoplin-dv42	SNP	*	map_l100_m1_e0	homalt	99.6291	99.4667	99.7919	61.1512	26859	144	26860	56	52	92.8571
rpoplin-dv42	SNP	*	map_l100_m0_e0	homalt	99.3564	98.9759	99.7398	62.7443	11501	119	11501	30	27	90.0000
rpoplin-dv42	SNP	*	lowcmp_SimpleRepeat_triTR_gt200	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
rpoplin-dv42	SNP	*	lowcmp_SimpleRepeat_triTR_51to200	homalt	100.0000	100.0000	100.0000	96.8254	2	0	2	0	0
rpoplin-dv42	SNP	*	lowcmp_SimpleRepeat_triTR_11to50	homalt	99.9452	99.9270	99.9635	32.1349	2736	2	2736	1	1	100.0000
rpoplin-dv42	SNP	*	lowcmp_SimpleRepeat_quadTR_gt200	homalt		0.0000		100.0000	0	0	0	0	0
rpoplin-dv42	SNP	*	lowcmp_SimpleRepeat_quadTR_51to200	homalt	98.8235	100.0000	97.6744	92.4429	41	0	42	1	1	100.0000
rpoplin-dv42	SNP	*	lowcmp_SimpleRepeat_quadTR_11to50	homalt	99.8741	99.9407	99.8075	37.7626	6741	4	6741	13	5	38.4615
rpoplin-dv42	SNP	*	lowcmp_SimpleRepeat_homopolymer_gt10	homalt		0.0000		100.0000	0	0	0	0	0
rpoplin-dv42	SNP	*	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	99.9507	99.9014	100.0000	54.7268	6082	6	6082	0	0
rpoplin-dv42	SNP	*	lowcmp_SimpleRepeat_diTR_51to200	homalt	93.3333	93.3333	93.3333	95.4955	14	1	14	1	0	0.0000
rpoplin-dv42	SNP	*	lowcmp_SimpleRepeat_diTR_11to50	homalt	99.7825	99.5948	99.9709	63.5497	3441	14	3441	1	1	100.0000
rpoplin-dv42	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	99.7936	99.6701	99.9173	72.0908	16919	56	16921	14	4	28.5714
rpoplin-dv42	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	99.7185	99.5147	99.9231	80.8305	3896	19	3898	3	1	33.3333
rpoplin-dv42	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	99.4703	99.1784	99.7639	83.7209	845	7	845	2	1	50.0000
rpoplin-dv42	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	homalt	99.4201	99.1588	99.6829	84.8446	943	8	943	3	1	33.3333
rpoplin-dv42	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
rpoplin-dv42	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	99.0990	99.0909	99.1071	90.7970	109	1	111	1	0	0.0000
rpoplin-dv42	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	homalt	99.7463	99.4939	100.0000	59.2175	1376	7	1376	0	0
rpoplin-dv42	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	homalt	99.7998	99.6004	100.0000	54.6227	2243	9	2243	0	0
rpoplin-dv42	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
rpoplin-dv42	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	99.8755	99.7514	100.0000	52.7941	1605	4	1605	0	0
rpoplin-dv42	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	99.7936	99.6701	99.9173	72.0908	16919	56	16921	14	4	28.5714
rpoplin-dv42	SNP	*	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	99.8787	99.8366	99.9207	56.8327	20166	33	20166	16	7	43.7500
rpoplin-dv42	SNP	*	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
rpoplin-dv42	SNP	*	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	99.7997	99.7140	99.8855	65.5220	1743	5	1745	2	1	50.0000
rpoplin-dv42	SNP	*	func_cds	homalt	99.9713	99.9427	100.0000	23.1405	6975	4	6975	0	0
rpoplin-dv42	SNP	*	decoy	homalt		0.0000		100.0000	0	0	0	0	0
rpoplin-dv42	SNP	*	HG002compoundhet	homalt	99.7682	99.8331	99.7035	35.1268	10764	18	10759	32	29	90.6250
rpoplin-dv42	SNP	*	HG002complexvar	homalt	99.9511	99.9421	99.9601	19.9304	288407	167	288378	115	109	94.7826
rpoplin-dv42	SNP	*	*	homalt	99.9769	99.9716	99.9821	18.2100	1179826	335	1179802	211	157	74.4076
rpoplin-dv42	INDEL	I6_15	tech_badpromoters	homalt	100.0000	100.0000	100.0000	66.6667	3	0	3	0	0
rpoplin-dv42	INDEL	I6_15	segdupwithalt	homalt		0.0000		100.0000	0	0	0	0	0
rpoplin-dv42	INDEL	I6_15	segdup	homalt	97.8261	95.7447	100.0000	90.7025	45	2	45	0	0

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