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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1698 1699 1700 1701 1702 1703 1704 1705 1706 ... 1720 1721 » 85051-85100 / 86044 show all
ghariani-varprowl	SNP	tv	map_l150_m0_e0	homalt	97.5460	95.7831	99.3750	80.3319	1272	56	1272	8	2	25.0000
ghariani-varprowl	SNP	tv	map_l150_m1_e0	homalt	98.6612	98.0487	99.2815	73.6565	3869	77	3869	28	15	53.5714
ghariani-varprowl	SNP	tv	map_l150_m2_e0	homalt	98.6939	98.0896	99.3057	75.8431	4005	78	4005	28	15	53.5714
ghariani-varprowl	SNP	tv	map_l150_m2_e1	homalt	98.7101	98.1132	99.3144	75.8171	4056	78	4056	28	15	53.5714
ghariani-varprowl	SNP	tv	map_l250_m0_e0	homalt	95.4907	93.2642	97.8261	94.7020	180	13	180	4	0	0.0000
ghariani-varprowl	SNP	tv	map_l250_m1_e0	homalt	97.7435	96.1449	99.3961	88.8575	823	33	823	5	1	20.0000
ghariani-varprowl	SNP	tv	map_l250_m2_e0	homalt	97.8308	96.2647	99.4487	89.6177	902	35	902	5	1	20.0000
ghariani-varprowl	SNP	tv	map_l250_m2_e1	homalt	97.8518	96.3002	99.4541	89.6696	911	35	911	5	1	20.0000
ghariani-varprowl	SNP	tv	map_siren	homalt	99.3038	99.2865	99.3211	57.8404	17117	123	17117	117	71	60.6838
ghariani-varprowl	SNP	tv	segdup	homalt	99.0657	99.8456	98.2979	91.0501	3233	5	3234	56	29	51.7857
ghariani-varprowl	SNP	tv	segdupwithalt	homalt		0.0000		100.0000	0	0	0	0	0
hfeng-pmm1	INDEL	D1_5	lowcmp_SimpleRepeat_triTR_51to200	homalt	92.8571	100.0000	86.6667	53.1250	13	0	13	2	2	100.0000
hfeng-pmm1	INDEL	D1_5	map_l100_m0_e0	homalt	99.4175	99.2248	99.6109	81.1722	256	2	256	1	1	100.0000
hfeng-pmm1	INDEL	D1_5	map_l100_m1_e0	homalt	99.5766	99.3243	99.8302	80.5031	588	4	588	1	1	100.0000
hfeng-pmm1	INDEL	D1_5	map_l100_m2_e0	homalt	99.5898	99.3453	99.8355	81.4067	607	4	607	1	1	100.0000
hfeng-pmm1	INDEL	D1_5	map_l100_m2_e1	homalt	99.5958	99.3548	99.8379	81.4993	616	4	616	1	1	100.0000
hfeng-pmm1	INDEL	D1_5	map_l125_m0_e0	homalt	98.9831	98.6486	99.3197	85.1215	146	2	146	1	1	100.0000
hfeng-pmm1	INDEL	D1_5	map_l125_m1_e0	homalt	99.4253	99.1404	99.7118	83.2690	346	3	346	1	1	100.0000
hfeng-pmm1	INDEL	D1_5	map_l125_m2_e0	homalt	99.4490	99.1758	99.7238	84.2814	361	3	361	1	1	100.0000
hfeng-pmm1	INDEL	D1_5	map_l125_m2_e1	homalt	99.4609	99.1935	99.7297	84.2620	369	3	369	1	1	100.0000
hfeng-pmm1	INDEL	D1_5	map_l150_m0_e0	homalt	98.8235	98.8235	98.8235	88.5445	84	1	84	1	1	100.0000
hfeng-pmm1	INDEL	D1_5	map_l150_m1_e0	homalt	99.1189	98.6842	99.5575	85.6690	225	3	225	1	1	100.0000
hfeng-pmm1	INDEL	D1_5	map_l150_m2_e0	homalt	99.1701	98.7603	99.5833	86.5697	239	3	239	1	1	100.0000
hfeng-pmm1	INDEL	D1_5	map_l150_m2_e1	homalt	99.1903	98.7903	99.5935	86.5058	245	3	245	1	1	100.0000
hfeng-pmm1	INDEL	D1_5	map_l250_m0_e0	homalt	100.0000	100.0000	100.0000	96.6921	13	0	13	0	0
hfeng-pmm1	INDEL	D1_5	map_l250_m1_e0	homalt	98.2143	96.4912	100.0000	93.1592	55	2	55	0	0
hfeng-pmm1	INDEL	D1_5	map_l250_m2_e0	homalt	98.3051	96.6667	100.0000	93.7433	58	2	58	0	0
hfeng-pmm1	INDEL	D1_5	map_l250_m2_e1	homalt	98.3051	96.6667	100.0000	93.9012	58	2	58	0	0
hfeng-pmm1	INDEL	D1_5	map_siren	homalt	99.7001	99.5719	99.8286	78.3166	1163	5	1165	2	2	100.0000
hfeng-pmm1	INDEL	D1_5	segdup	homalt	100.0000	100.0000	100.0000	93.9603	359	0	359	0	0
hfeng-pmm1	INDEL	D1_5	segdupwithalt	homalt		0.0000		100.0000	0	0	0	0	0
hfeng-pmm1	INDEL	D1_5	tech_badpromoters	homalt	100.0000	100.0000	100.0000	43.7500	9	0	9	0	0
hfeng-pmm1	INDEL	D6_15	*	homalt	99.4474	99.5732	99.3220	50.6075	6299	27	6299	43	42	97.6744
hfeng-pmm1	INDEL	D6_15	HG002complexvar	homalt	99.5730	99.7434	99.4032	61.2103	1166	3	1166	7	7	100.0000
hfeng-pmm1	INDEL	D6_15	HG002compoundhet	homalt	53.3333	100.0000	36.3636	67.8049	24	0	24	42	42	100.0000
hfeng-pmm1	INDEL	D6_15	decoy	homalt		0.0000		100.0000	0	0	0	0	0
hfeng-pmm1	INDEL	D6_15	func_cds	homalt	100.0000	100.0000	100.0000	55.5556	12	0	12	0	0
hfeng-pmm1	INDEL	D6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	96.1507	97.5083	94.8304	50.6380	587	15	587	32	31	96.8750
hfeng-pmm1	INDEL	D6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt	100.0000	100.0000	100.0000	97.6190	1	0	1	0	0
hfeng-pmm1	INDEL	D6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	99.6018	99.6976	99.5062	56.7205	3627	11	3627	18	18	100.0000
hfeng-pmm1	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	99.1261	99.3893	98.8642	54.0422	3743	23	3743	43	42	97.6744
hfeng-pmm1	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	98.8235	97.6744	100.0000	76.4045	42	1	42	0	0
hfeng-pmm1	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
hfeng-pmm1	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	homalt	99.8661	99.7326	100.0000	58.3705	373	1	373	0	0
hfeng-pmm1	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	homalt	100.0000	100.0000	100.0000	56.3613	343	0	343	0	0
hfeng-pmm1	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	95.2809	97.0252	93.5982	46.7059	424	13	424	29	29	100.0000
hfeng-pmm1	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	homalt	100.0000	100.0000	100.0000	75.0000	1	0	1	0	0
hfeng-pmm1	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	homalt	98.9167	99.3224	98.5143	47.0103	2785	19	2785	42	42	100.0000
hfeng-pmm1	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	99.5997	99.7468	99.4531	47.3533	2364	6	2364	13	13	100.0000
hfeng-pmm1	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	99.0239	99.3681	98.6821	49.3000	3145	20	3145	42	42	100.0000

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