PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
1551-1600 / 86044 show all
rpoplin-dv42INDELD1_5func_cdshet
100.0000
100.0000
100.0000
45.9119
8508600
rpoplin-dv42INDELD1_5func_cds*
100.0000
100.0000
100.0000
40.7407
159016000
rpoplin-dv42INDELD1_5decoyhomalt
100.0000
100.0000
100.0000
99.9450
10100
rpoplin-dv42INDELD1_5decoyhetalt
100.0000
100.0000
100.0000
99.6700
10100
rpoplin-dv42INDELD1_5decoyhet
100.0000
100.0000
100.0000
99.9601
20200
rpoplin-dv42INDELD1_5decoy*
100.0000
100.0000
100.0000
99.9439
40400
rpoplin-dv42INDELD1_5HG002compoundhethomalt
93.1153
98.9691
87.9154
78.3801
28832914038
95.0000
rpoplin-dv42INDELD1_5HG002compoundhethetalt
96.8685
94.3226
99.5556
55.8683
963658096324342
97.6744
rpoplin-dv42INDELD1_5HG002compoundhethet
90.2551
96.8171
84.5262
76.1853
1673551677307300
97.7199
rpoplin-dv42INDELD1_5HG002compoundhet*
95.7563
94.7855
96.7473
62.2778
1159763811600390380
97.4359
rpoplin-dv42INDELD1_5HG002complexvarhomalt
99.7026
99.6414
99.7639
58.4249
1056038105652523
92.0000
rpoplin-dv42INDELD1_5HG002complexvarhetalt
94.1845
91.9379
96.5438
71.6833
124310912574544
97.7778
rpoplin-dv42INDELD1_5HG002complexvarhet
99.5249
99.3402
99.7103
55.5097
20628137206526048
80.0000
rpoplin-dv42INDELD1_5HG002complexvar*
99.3660
99.1319
99.6013
57.4494
3243128432474130115
88.4615
rpoplin-dv42INDELD1_5*homalt
99.7606
99.6505
99.8710
59.0122
48755171487606356
88.8889
rpoplin-dv42INDELD1_5*hetalt
96.7748
94.2997
99.3834
61.0557
966158496716059
98.3333
rpoplin-dv42INDELD1_5*het
99.5696
99.7077
99.4320
57.4420
8731825687348499434
86.9739
rpoplin-dv42INDELD1_5**
99.4429
99.3110
99.5751
58.2332
1457341011145779622549
88.2637
rpoplin-dv42INDELD16_PLUStech_badpromotershomalt
0.0000
100.0000
00000
rpoplin-dv42INDELD16_PLUStech_badpromotershetalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELD16_PLUStech_badpromotershet
100.0000
100.0000
100.0000
0.0000
40400
rpoplin-dv42INDELD16_PLUStech_badpromoters*
100.0000
100.0000
100.0000
33.3333
40400
rpoplin-dv42INDELD16_PLUSsegdupwithalthomalt
0.0000
100.0000
00000
rpoplin-dv42INDELD16_PLUSsegdupwithalthetalt
0.0000
100.0000
00000
rpoplin-dv42INDELD16_PLUSsegdupwithalthet
0.0000
100.0000
00000
rpoplin-dv42INDELD16_PLUSsegdupwithalt*
0.0000
100.0000
00000
rpoplin-dv42INDELD16_PLUSsegduphomalt
100.0000
100.0000
100.0000
94.5946
1201200
rpoplin-dv42INDELD16_PLUSsegduphetalt
80.0000
66.6667
100.0000
93.4783
63600
rpoplin-dv42INDELD16_PLUSsegduphet
96.1039
100.0000
92.5000
93.3775
3703733
100.0000
rpoplin-dv42INDELD16_PLUSsegdup*
94.8276
94.8276
94.8276
93.6819
5535533
100.0000
rpoplin-dv42INDELD16_PLUSmap_sirenhomalt
93.9394
91.1765
96.8750
88.8889
3133110
0.0000
rpoplin-dv42INDELD16_PLUSmap_sirenhetalt
80.7692
67.7419
100.0000
73.8095
21102200
rpoplin-dv42INDELD16_PLUSmap_sirenhet
90.0217
87.1795
93.0556
91.7526
68106753
60.0000
rpoplin-dv42INDELD16_PLUSmap_siren*
89.2193
83.9161
95.2381
89.8795
1202312063
50.0000
rpoplin-dv42INDELD16_PLUSmap_l250_m2_e1homalt
100.0000
100.0000
100.0000
97.8723
10100
rpoplin-dv42INDELD16_PLUSmap_l250_m2_e1hetalt
100.0000
100.0000
100.0000
92.3077
10100
rpoplin-dv42INDELD16_PLUSmap_l250_m2_e1het
100.0000
100.0000
100.0000
96.5517
30300
rpoplin-dv42INDELD16_PLUSmap_l250_m2_e1*
100.0000
100.0000
100.0000
96.5986
50500
rpoplin-dv42INDELD16_PLUSmap_l250_m2_e0homalt
100.0000
100.0000
100.0000
97.8723
10100
rpoplin-dv42INDELD16_PLUSmap_l250_m2_e0hetalt
100.0000
100.0000
100.0000
92.3077
10100
rpoplin-dv42INDELD16_PLUSmap_l250_m2_e0het
100.0000
100.0000
100.0000
96.4286
30300
rpoplin-dv42INDELD16_PLUSmap_l250_m2_e0*
100.0000
100.0000
100.0000
96.5278
50500
rpoplin-dv42INDELD16_PLUSmap_l250_m1_e0homalt
0.0000
100.0000
00000
rpoplin-dv42INDELD16_PLUSmap_l250_m1_e0hetalt
100.0000
100.0000
100.0000
92.3077
10100
rpoplin-dv42INDELD16_PLUSmap_l250_m1_e0het
100.0000
100.0000
100.0000
96.0000
30300
rpoplin-dv42INDELD16_PLUSmap_l250_m1_e0*
100.0000
100.0000
100.0000
96.9697
40400
rpoplin-dv42INDELD16_PLUSmap_l250_m0_e0homalt
0.0000
100.0000
00000
rpoplin-dv42INDELD16_PLUSmap_l250_m0_e0hetalt
0.0000
100.0000
00000
rpoplin-dv42INDELD16_PLUSmap_l250_m0_e0het
100.0000
100.0000
100.0000
97.5610
10100
rpoplin-dv42INDELD16_PLUSmap_l250_m0_e0*
100.0000
100.0000
100.0000
98.5714
10100