PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
1651-1700 / 86044 show all
anovak-vgINDELI1_5lowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
7.2626
0.0000
0.0000
13166000
anovak-vgINDELI1_5lowcmp_SimpleRepeat_diTR_51to200homalt
0.0000
0.0000
25.0000
66.6667
00133
100.0000
anovak-vgINDELI1_5lowcmp_SimpleRepeat_homopolymer_6to10*
59.0705
52.5583
67.4247
65.2810
13971261302414611247
85.3525
anovak-vgINDELI1_5lowcmp_SimpleRepeat_homopolymer_6to10het
41.7184
27.7293
84.1930
71.7265
3819931518285107
37.5439
anovak-vgINDELI1_5lowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
26.8987
0.0000
0.0000
85231000
anovak-vgINDELI1_5lowcmp_SimpleRepeat_homopolymer_6to10homalt
70.9064
96.1777
56.1521
58.9971
93137150611761140
96.9388
anovak-vgINDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10*
100.0000
100.0000
10000
anovak-vgINDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
anovak-vgINDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
100.0000
0.0000
0.0000
10000
anovak-vgINDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
anovak-vgINDELI1_5lowcmp_SimpleRepeat_quadTR_11to50*
54.2561
49.7820
59.6139
54.7156
19411958305720711674
80.8305
anovak-vgINDELI1_5lowcmp_SimpleRepeat_quadTR_11to50het
44.8785
34.5273
64.0937
56.3014
58811151669935605
64.7059
anovak-vgINDELI1_5lowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
33.3333
0.0000
0.0000
377754000
anovak-vgINDELI1_5lowcmp_SimpleRepeat_quadTR_11to50homalt
68.7372
91.6432
54.9921
52.9543
97689138811361069
94.1021
anovak-vgINDELI1_5lowcmp_SimpleRepeat_quadTR_51to200*
29.0406
21.9331
42.9630
60.8128
59210116154129
83.7662
anovak-vgINDELI1_5lowcmp_SimpleRepeat_quadTR_51to200het
43.5378
41.1765
46.1864
59.0278
2130109127107
84.2520
anovak-vgINDELI1_5lowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
17.0507
0.0000
0.0000
37180000
anovak-vgINDELI1_5lowcmp_SimpleRepeat_quadTR_51to200homalt
34.1463
100.0000
20.5882
69.9115
1072722
81.4815
anovak-vgINDELI1_5lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
0.0000
0.0000
00000
anovak-vgINDELI1_5lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
anovak-vgINDELI1_5lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELI1_5lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELI1_5lowcmp_SimpleRepeat_triTR_11to50*
56.0188
50.6667
62.6353
47.3349
532518984587499
85.0085
anovak-vgINDELI1_5lowcmp_SimpleRepeat_triTR_11to50het
42.9780
30.8511
70.8134
48.1390
145325592244168
68.8525
anovak-vgINDELI1_5lowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
44.0895
0.0000
0.0000
138175000
anovak-vgINDELI1_5lowcmp_SimpleRepeat_triTR_11to50homalt
67.8590
93.2584
53.3333
46.3895
24918392343331
96.5015
anovak-vgINDELI1_5lowcmp_SimpleRepeat_triTR_51to200*
12.7389
8.0000
31.2500
63.6364
22351111
100.0000
anovak-vgINDELI1_5lowcmp_SimpleRepeat_triTR_51to200het
0.0000
0.0000
41.6667
69.2308
02577
100.0000
anovak-vgINDELI1_5lowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
8.6957
0.0000
0.0000
221000
anovak-vgINDELI1_5lowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
0.0000
20.0000
00044
100.0000
anovak-vgINDELI1_5lowcmp_SimpleRepeat_triTR_gt200*
0.0000
100.0000
00000
anovak-vgINDELI1_5lowcmp_SimpleRepeat_triTR_gt200het
0.0000
100.0000
00000
anovak-vgINDELI1_5lowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELI1_5lowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELI1_5map_l100_m0_e0*
58.1032
59.3002
56.9536
86.9940
322221344260177
68.0769
anovak-vgINDELI1_5map_l100_m0_e0het
47.2130
37.7301
63.0631
92.0173
1232031408210
12.1951
anovak-vgINDELI1_5map_l100_m0_e0hetalt
0.0000
55.5556
0.0000
0.0000
54000
anovak-vgINDELI1_5map_l100_m0_e0homalt
67.9183
93.2692
53.4031
79.4954
19414204178167
93.8202
anovak-vgINDELI1_5map_l100_m1_e0*
58.0113
59.2233
56.8479
83.7016
793546826627447
71.2919
anovak-vgINDELI1_5map_l100_m1_e0het
47.9187
38.2239
64.2023
89.2961
29748033018431
16.8478
anovak-vgINDELI1_5map_l100_m1_e0hetalt
0.0000
34.0909
0.0000
0.0000
1529000
anovak-vgINDELI1_5map_l100_m1_e0homalt
67.3385
92.8571
52.8222
77.1699
48137496443416
93.9052
anovak-vgINDELI1_5map_l100_m2_e0*
58.1587
59.3567
57.0081
84.8215
812556846638455
71.3166
anovak-vgINDELI1_5map_l100_m2_e0het
48.1704
38.4615
64.4359
89.9093
30548833718631
16.6667
anovak-vgINDELI1_5map_l100_m2_e0hetalt
0.0000
34.0909
0.0000
0.0000
1529000
anovak-vgINDELI1_5map_l100_m2_e0homalt
67.4017
92.6554
52.9657
79.0814
49239509452424
93.8053
anovak-vgINDELI1_5map_l100_m2_e1*
57.8586
58.9964
56.7639
84.9109
823572856652469
71.9325
anovak-vgINDELI1_5map_l100_m2_e1het
47.7657
37.9012
64.5714
90.0794
30750333918631
16.6667
anovak-vgINDELI1_5map_l100_m2_e1hetalt
0.0000
33.3333
0.0000
0.0000
1530000
anovak-vgINDELI1_5map_l100_m2_e1homalt
67.1322
92.7778
52.5941
79.0940
50139517466438
93.9914