PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryType SubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
951-1000 / 86044 show all
raldana-dualsentieonSNPtilowcmp_AllRepeats_51to200bp_gt95identity_mergedhet
98.1509
97.0356
99.2922
64.9042
1964601964140
0.0000
raldana-dualsentieonSNPtilowcmp_AllRepeats_51to200bp_gt95identity_merged*
98.7585
97.9680
99.5620
62.6286
3182663182140
0.0000
raldana-dualsentieonSNPtifunc_cdshomalt
99.9905
99.9810
100.0000
19.3825
52741527400
raldana-dualsentieonSNPtifunc_cdshetalt
100.0000
100.0000
100.0000
46.6667
80800
raldana-dualsentieonSNPtifunc_cdshet
99.8414
99.9412
99.7418
23.3144
849958497220
0.0000
raldana-dualsentieonSNPtifunc_cds*
99.8985
99.9565
99.8406
21.8782
13781613779220
0.0000
raldana-dualsentieonSNPtidecoyhomalt
0.0000
100.0000
00000
raldana-dualsentieonSNPtidecoyhetalt
0.0000
100.0000
00000
raldana-dualsentieonSNPtidecoyhet
0.0000
100.0000
00000
raldana-dualsentieonSNPtidecoy*
0.0000
100.0000
00000
raldana-dualsentieonSNPtiHG002compoundhethomalt
99.9189
99.9189
99.9189
30.4421
73886738866
100.0000
raldana-dualsentieonSNPtiHG002compoundhethetalt
99.8270
99.6546
100.0000
21.4966
577257700
raldana-dualsentieonSNPtiHG002compoundhethet
96.7997
93.8769
99.9104
38.0325
8923582892484
50.0000
raldana-dualsentieonSNPtiHG002compoundhet*
98.2432
96.6243
99.9172
34.4311
16888590168891410
71.4286
raldana-dualsentieonSNPtiHG002complexvarhomalt
99.9811
99.9726
99.9897
18.3281
193410531934012020
100.0000
raldana-dualsentieonSNPtiHG002complexvarhetalt
99.5146
99.0338
100.0000
34.5048
205220500
raldana-dualsentieonSNPtiHG002complexvarhet
99.8369
99.6928
99.9815
16.7345
313799967313748589
15.5172
raldana-dualsentieonSNPtiHG002complexvar*
99.8917
99.7990
99.9846
17.3582
50741410225073547829
37.1795
raldana-dualsentieonSNPti*homalt
99.9899
99.9839
99.9959
15.7711
8029091298029013332
96.9697
raldana-dualsentieonSNPti*hetalt
99.7420
99.6564
99.8279
37.7278
580258011
100.0000
raldana-dualsentieonSNPti*het
99.9019
99.8809
99.9229
17.7757
12803641527128031398821
2.1255
raldana-dualsentieonSNPti**
99.9357
99.9205
99.9510
17.0225
208385316582083794102254
5.2838
raldana-dualsentieonSNP*tech_badpromotershomalt
98.1366
98.7500
97.5309
46.0000
7917922
100.0000
raldana-dualsentieonSNP*tech_badpromotershetalt
0.0000
0.0000
0.0000
00000
raldana-dualsentieonSNP*tech_badpromotershet
98.0132
96.1039
100.0000
46.3768
7437400
raldana-dualsentieonSNP*tech_badpromoters*
98.0769
97.4522
98.7097
46.1806
153415322
100.0000
raldana-dualsentieonSNP*segdupwithalthomalt
0.0000
100.0000
00000
raldana-dualsentieonSNP*segdupwithalthetalt
0.0000
100.0000
00000
raldana-dualsentieonSNP*segdupwithalthet
0.0000
100.0000
00000
raldana-dualsentieonSNP*segdupwithalt*
0.0000
100.0000
00000
raldana-dualsentieonSNP*segduphomalt
99.9022
99.8883
99.9162
87.9114
10731121073199
100.0000
raldana-dualsentieonSNP*segduphetalt
100.0000
100.0000
100.0000
96.2766
70700
raldana-dualsentieonSNP*segduphet
99.4013
99.7344
99.0704
90.7424
1727146172651621
0.6173
raldana-dualsentieonSNP*segdup*
99.5928
99.7934
99.3931
89.8391
28009582800317110
5.8480
raldana-dualsentieonSNP*map_sirenhomalt
99.8920
99.8187
99.9655
49.6673
55056100550471919
100.0000
raldana-dualsentieonSNP*map_sirenhetalt
97.5000
96.2963
98.7342
67.0833
7837811
100.0000
raldana-dualsentieonSNP*map_sirenhet
99.3673
99.4219
99.3127
56.6962
904655269045162610
1.5974
raldana-dualsentieonSNP*map_siren*
99.5640
99.5698
99.5582
54.3006
14559962914557664630
4.6440
raldana-dualsentieonSNP*map_l250_m2_e1homalt
99.4834
99.1906
99.7779
85.3835
269622269663
50.0000
raldana-dualsentieonSNP*map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
88.0952
50500
raldana-dualsentieonSNP*map_l250_m2_e1het
97.5147
97.6444
97.3854
89.4825
514012451401383
2.1739
raldana-dualsentieonSNP*map_l250_m2_e1*
98.1843
98.1720
98.1966
88.3789
784114678411446
4.1667
raldana-dualsentieonSNP*map_l250_m2_e0homalt
99.4772
99.1809
99.7753
85.3224
266422266463
50.0000
raldana-dualsentieonSNP*map_l250_m2_e0hetalt
100.0000
100.0000
100.0000
87.8049
50500
raldana-dualsentieonSNP*map_l250_m2_e0het
97.5099
97.6319
97.3881
89.3936
507112350711363
2.2059
raldana-dualsentieonSNP*map_l250_m2_e0*
98.1797
98.1611
98.1984
88.2926
774014577401426
4.2254
raldana-dualsentieonSNP*map_l250_m1_e0homalt
99.4502
99.1474
99.7549
84.1101
244221244263
50.0000
raldana-dualsentieonSNP*map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
88.8889
40400
raldana-dualsentieonSNP*map_l250_m1_e0het
97.3427
97.4553
97.2304
88.8130
463412146341323
2.2727
raldana-dualsentieonSNP*map_l250_m1_e0*
98.0609
98.0338
98.0881
87.5648
708014270801386
4.3478